Pinned Repositories
BioFSharp
Open source bioinformatics and computational biology toolbox written in F#.
BioFSharp.Mz
BioFSharp.Mz - modular computational proteomics
deepStabP
A small web ui and python api service to predict protein melting point temperatures.
DynamicObj
F# library supporting Dynamic Objects including inheritance in functional style
FSharp.FGL
Functional graph library for F#
FSharpAux
Auxiliary functions and data structures for the F# programming language
FSharpGephiStreamer
F# functions for streaming any kind of graph/network data to the network visualization tool gephi
FSharpML
Library for the FSharp friendly usage of the ML.NET project. For documentation visit:
MzLite
Reader and writer for different mzData formats used in protein mass spectrometry
ProteomIQon
Computational Systems Biology's Repositories
CSBiology/BioFSharp
Open source bioinformatics and computational biology toolbox written in F#.
CSBiology/FSharp.FGL
Functional graph library for F#
CSBiology/FSharpAux
Auxiliary functions and data structures for the F# programming language
CSBiology/BioFSharp.Mz
BioFSharp.Mz - modular computational proteomics
CSBiology/DynamicObj
F# library supporting Dynamic Objects including inheritance in functional style
CSBiology/deepStabP
A small web ui and python api service to predict protein melting point temperatures.
CSBiology/ProteomIQon
CSBiology/CSBlog
The blog about all things CSB
CSBiology/MzIO
Generic data model to unify various readers and writers for different formats used in protein mass spectrometry
CSBiology/TMEA
Thermodynamically Motivated Enrichment Analysis (TMEA) is a new approach to gene set enrichment analysis.
CSBiology/LitXml
Small FSharp based DSL for writing literal xml
CSBiology/FsDocker
F# Client for Docker Remote API based on Docker.DotNet Project
CSBiology/BIO-BTE-06-L-7
Notebooks, scripts and guides for the computational section of VM 1/ VM 2: Practical class - Molecular Biotechnology II (BIO-BTE-06-L-7)
CSBiology/YAMLicious
CSBiology/BioFSharp.Vis
Data visualization for bioinformatic purposes, containing for instance Venn and Chord diagramms
CSBiology/iMLP
codebase and dotnet CLI tool for prediction of iMTS-Ls
CSBiology/OBO.NET
An OBO file format parser, written in F#.
CSBiology/Slurmi
CSBiology/BIO-MBP-06-U-2
Notebooks for the practical course
CSBiology/csbiology.github.io
Website for teaching, publications and news from CSB (Computational Systems Biology)
CSBiology/Drafo
CSBiology/iMLP_Web
codebase of our webservice for prediction of iMTS-Ls
CSBiology/BIO-BTE-10-L-4
Project suggestions for the project work for Wissenschaftliche Programmierung für Biolog*innen (BIO-BTE-10-L-4)
CSBiology/FSharpSpreadsheetML
FSharp wrapper for Open XML SDK, allowing Excel File reading and manipulation
CSBiology/TempClass
Package for fitting and classification of short and noisy time series using constrained smoothing splines.
CSBiology/BioInfoIntro
CSBiology/ChlamyAtlas
Chlamy Atlas is a AI-powered web application which predicts the localizations of proteins from the Green Algae Chlamydomonas reinhardtii.
CSBiology/FsODE
Ordinary Differential Equation (ODE) Models in F#
CSBiology/FsOntology
A toolkit for working with ontology data structures in .NET
CSBiology/OntologyEnrichment
Command line tool to perform functional annotation and ontology enrichments for Chlamydomonas and Arabidopsis