CarstenWolff

CarstenWolff's Stars

• cnr-isti-vclab/meshlab

  The open source mesh processing system

  Language:C++4.8k1591.1k823

• jasonwebb/morphogenesis-resources

  Resources on the topic of digital morphogenesis (creating form with code). Includes links to major articles, code repos, creative projects, books, software, and more.

  2k10537116

• ilastik/ilastik

  ilastik-shell, applets, and workflows to string them together.

  Language:Python350402k130

• clEsperanto/pyclesperanto_prototype

  GPU-accelerated bio-image analysis focusing on 3D+t microscopy image data

  Language:Jupyter Notebook2101414146

• saalfeldlab/n5

  Not HDF5

  Language:Java160174622

• mastodon-sc/mastodon

  Mastodon – a large-scale tracking and track-editing framework for large, multi-view images.

  Language:Java692212120

• clij/clij

  CLIJ is deprecated. Visit CLIJ2

  Language:Java569148

• saalfeldlab/stitching-spark

  Reconstruct big images from overlapping tiled images on a Spark cluster.

  Language:Java3413319

• stardist/stardist-imagej

  StarDist plugin for ImageJ

  Language:Java2771414

• bigdataviewer/bigdataviewer-vistools

  Helpers to use BigDataViewer as a quick visualization tool in other projects.

  Language:Java2581417

• baigouy/EPySeg

  Language:Python22495

• saalfeldlab/n5-utils

  simple standalone BigDataViewer for multiple N5 (or HDF5) datasets

  Language:Java872016

• bruvellu/simi.py

  Python library to access cell lineage data from Simi BioCell

  Language:Python3411

• marionlouveaux/mamut2r

  R package to read xml outputs from MaMut Fiji plugin and create treemap plots.

  Language:R2202

• guleom/BioCell2XML

  A tool for converting cell lineage data from SIMI BioCell to MaMuT (Fiji)

  Language:Python110

• jirikowg/Pytools_4_MaMut

  This is a set of python-programs that can perform different tasks on cell lineage data created with the FIJI-plugin MaMuT.

  Language:Python110