ChrisHIV

Epidemiology & evolution of HIV and COVID-19 using statistical modelling, mathematical modelling and genomics

Pinned Repositories

nhs_covid_app_evaluation
Language:R33
phyloscanner
Phylogenetics between and within hosts at once, all along the genome.
Language:HTML47 14 6114
bioconda-recipes
Conda recipes for the bioconda channel.
Language:Shell0 0 00
GeneExtractor
Extract a desired genomic region from nucleotide sequences and translate to amino acids, using blastx
Language:Shell1 1 00
hiv_vb_variant
Language:R4 1 40
misc
Language:R0 1 00
OpenABM-Covid19
Language:Python0 0 00
SeqAnalTools
Command-line tools for analysing and manipulating sequence data, written for my own needs.
Language:Python1 1 02
shiver
Sequences from HIV Easily Reconstructed
Language:Python25 10 1715
teaching
Language:HTML17 2 12

ChrisHIV's Repositories

ChrisHIV/shiver
Sequences from HIV Easily Reconstructed
Language:Python25 10 1715
ChrisHIV/teaching
Language:HTML17 2 12
ChrisHIV/hiv_vb_variant
Language:R4 1 40
ChrisHIV/GeneExtractor
Extract a desired genomic region from nucleotide sequences and translate to amino acids, using blastx
Language:Shell1 1 00
ChrisHIV/SeqAnalTools
Command-line tools for analysing and manipulating sequence data, written for my own needs.
Language:Python1 1 02
ChrisHIV/bioconda-recipes
Conda recipes for the bioconda channel.
Language:Shell0 0 00
ChrisHIV/misc
Language:R0 1 00
ChrisHIV/OpenABM-Covid19
Language:Python0 0 00