Issues
- 1
How we calculate VAF in scout
#4686 opened by northwestwitch - 0
SV variants and large SNVs collide in variant_id
#4682 opened by dnil - 0
- 0
Link to HGNC portal broken on gene page
#4679 opened by northwestwitch - 0
Import chanjo-report warning emitted before log level set
#4675 opened by dnil - 0
Warnings when loqusdb-api is not reachable
#4669 opened by dnil - 1
Change LDAP library?
#4619 opened by northwestwitch - 0
- 4
CLI option to remove an institute
#4665 opened by Jakob37 - 4
nf-core/raredisease MT variants loading
#4672 opened by dnil - 1
- 3
Extremely slow loading of variant pages when loqusdb instance can't be reached
#4668 opened by northwestwitch - 6
CLI option to link a panel to multiple institutes
#4666 opened by Jakob37 - 5
Speeding up case page interactions
#4655 opened by Jakob37 - 2
"scout setup demo" is loading also research variants, but they are not shown as a category of available vars on case page
#4661 opened by northwestwitch - 0
- 2
Lost access to Scout
#4649 opened by Lucpen - 2
Can't connect to chanjo database
#4648 opened by northwestwitch - 0
Prod/stage divide for CLINVAR settings
#4611 opened by dnil - 2
Hardcoded secret key
#4627 opened by Asterius27 - 1
Empty phenotype_terms - after editing genes perhaps?
#4642 opened by dnil - 0
Hide not-applicable reports for e.g. tomte cases
#4639 opened by dnil - 2
Deployments on cg-vm1 fail
#4641 opened by northwestwitch - 0
MT report crashes for cases where one or more samples are not in chanjo database
#4637 opened by northwestwitch - 4
Shall we parse and add to DB obsolete HPO terms?
#4604 opened by northwestwitch - 0
Add SVG logos
#4633 opened by dnil - 3
chromograph view
#4628 opened by 4WGH - 1
STR estimated size from old cases...
#4624 opened by dnil - 1
Clearer warning for sample sex mismatch
#4621 opened by Jakob37 - 2
Revert to primary flask-ldapconn once its PyPi is up to date
#4613 opened by dnil - 5
- 2
No chanjo-report endpoint found
#4614 opened by northwestwitch - 5
- 2
Werkzeug vuln <3.0.3
#4610 opened by dnil - 9
ncRNA genes and the clinical filter
#4609 opened by ielvers - 1
Error adding variant to ClinVar
#4607 opened by northwestwitch - 2
User friendly error message for no default panel
#4605 opened by Jakob37 - 1
Empty API diagnoses query crashes
#4601 opened by dnil - 1
- 2
- 4
Improve PDF view of the delivery reports
#4571 opened by ivadym - 0
ClinVar submission manual entry field checks
#4581 opened by dnil - 1
ClinVar submission error - variant location for indel
#4590 opened by dnil - 0
- 1
ClinVar submission dark mode
#4580 opened by dnil - 0
- 2
- 4
Test action fails when installing the PDF renderer
#4584 opened by northwestwitch - 0
- 5
Gnomad v4 link not working for STR variants
#4568 opened by Jakob37