Extending path with identical start and end kmer
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Colelyman commented
Currently, the extendPath
method will only return the startKmer
when startKmer == endKmer
. Is this the correct behavior should a bubble be able to be a loop?
I think that a bubble should be able to be a loop, because if the endKmer
is the same as the startKmer
, then there has to be a path that forms that loop. Furthermore, biologically a loop can suggest an indel in one species that is not present in others.