ConesaLab - Genomics of gene expression

Pinned Repositories

acorde
Isoform co-usage networks from single-cell RNA-seq data
Language:HTML14 2 32
MDM
Workflow and package for network approach to study the role of microbial dark matter (MDM)
Language:R6 1 14
MOSim
Bulk and single-cell Multi-Omics ground truth Simulator in R
Language:R6 0 31
MultiPower
Statistical power studies for multi-omics experiments.
Language:R28 8 610
Padhoc
Text mining tool for biological pathways reconstruction
Language:Python6 4 00
SQANTI
Language:Python10 5 23
SQANTI-SIM
A simulator of controlled transcript novelty for lrRNA-seq benchmark
Language:HTML6 0 31
SQANTI3
Tool for the Quality Control of Long-Read Defined Transcriptomes
Language:HTML189 10 27346
tappAS
This repository contains the source code for the tappAS application. See README for details.
Language:Java16 4 562
TCR_nextflow
Language:Nextflow10 3 12

ConesaLab - Genomics of gene expression's Repositories

ConesaLab/SQANTI3
Tool for the Quality Control of Long-Read Defined Transcriptomes
Language:HTML189 10 27346
ConesaLab/MultiPower
Statistical power studies for multi-omics experiments.
Language:R28 8 610
ConesaLab/tappAS
This repository contains the source code for the tappAS application. See README for details.
Language:Java16 4 562
ConesaLab/acorde
Isoform co-usage networks from single-cell RNA-seq data
Language:HTML14 2 32
ConesaLab/SQANTI
Language:Python10 5 23
ConesaLab/TCR_nextflow
Language:Nextflow10 3 12
ConesaLab/MDM
Workflow and package for network approach to study the role of microbial dark matter (MDM)
Language:R6 1 14
ConesaLab/MOSim
Bulk and single-cell Multi-Omics ground truth Simulator in R
Language:R6 0 31
ConesaLab/Padhoc
Text mining tool for biological pathways reconstruction
Language:Python6 4 00
ConesaLab/SQANTI-SIM
A simulator of controlled transcript novelty for lrRNA-seq benchmark
Language:HTML6 0 31
ConesaLab/IsoAnnot
Language:Python5 1 0
ConesaLab/MORE
Discover regulatory relationships for multi-omics data using regression models.
Language:R5 4 01
ConesaLab/MultiBaC
Single and multiomic batch effect correction
Language:R5 4 62
ConesaLab/paintomics4
Language:JavaScript5 2 10
ConesaLab/MirCure
microRNA quality control, filter, and curation.
Language:R4 2 00
ConesaLab/RColorConesa
Conesa Palette for R
Language:R4 1 0
ConesaLab/Coxmos
Survival Analyses for High Dimensional Data
Language:HTML2 0 0
ConesaLab/NOISeq
NOISeq package
2 1 2
ConesaLab/MAMBA
Language:MATLAB1 0 0
ConesaLab/MultiMip6
1 2 0
ConesaLab/TEDDY_Multi-Omics_Integration
Language:R1 3 01
ConesaLab/beanTFBSs
Language:R1 0
ConesaLab/DeCovid
Transcriptomics analysis for COVID-19 Disease Map genes.
Language:R2 0
ConesaLab/MHE_Multi-Omics_Integration
MHE: Mimimal Hepatic Encephalopathy
Language:R1 0
ConesaLab/Perspective_Multi-Omics_Integration
Repository containing supplementary code for Tarazona et al. 2021, Nat. Comp. Sci.
Language:HTML2 0