DFKoetsier

Pinned Repositories

• cram2fastq

  Convert CRAM files stored in GCP to FASTQ

  Language:Shell1600

• hmftools

  Various algorithms for analysing genomics data

  Language:Java1891944858

• k8-align

  Align FASTQ and dedup bams in kubernetes

  Language:Shell0500

• k8-flagstat

  Run sambamba flagstat in kubernetes

  Language:Shell0500

• k8analysis

  Run data analysis jobs in Kubernetes

  Language:Python1500

• oncoact

  Algo's used in the OncoAct pipeline

  Language:Java1400

• peach

  Describe PEACH

  Language:Python1510

• pipeline5

  Language:Java18333

• platinum

  Run multiple Pipeline5 instances at once

  Language:Java9431

• scripts

  Language:Shell207614

DFKoetsier's Repositories