DSPsleeporg/smiles-transformer
Original implementation of the paper "SMILES Transformer: Pre-trained Molecular Fingerprint for Low Data Drug Discovery" by Shion Honda et al.
Jupyter NotebookMIT
Issues
- 15
instructions for generating vocab.pkl?
#17 opened by manavsingh415 - 0
- 1
Hyperparameters used
#27 opened by nschweitzer2 - 5
Shouldn't here be a +=?
#20 opened by wendlerc - 2
what is data/vocab.pkl ?
#15 opened by wangqixun - 1
Loss Function Used
#26 opened by witnik - 2
Encoding/embedding used in publication?
#21 opened by stevendbrown - 1
- 2
Why SMILES length longer than 218 is too long?
#24 opened by 1633232731 - 2
- 4
Missing vocab.pkl for pretrained model
#11 opened by jeremyadamsfisher - 0
- 0
Can't reproduce vocab.pkl with script
#14 opened by korney3 - 2
Is pretrained model available?
#13 opened by masato-tsutsui - 1
Upload vocab.pkl
#12 opened by rajathsalegame - 3
Make the pretrained model available
#10 opened by linlinzhao - 0
Questions about data files
#9 opened by mallertian - 0
- 5
Files needed to run the examples
#1 opened by joseFranciscoDiez - 6
Unable to run example notebooks
#5 opened by mfratello - 2
No module named 'pretrain_trfm'
#6 opened by xuzhang5788 - 1
Where is your data folder?
#7 opened by xuzhang5788 - 2
- 1
- 1
Do you plan to release the pretrained model?
#2 opened by xptree