DanYamamotoEvans

Systems biology / Bioinformatics / Lab automation

Student, Keio University JPN

Pinned Repositories

BFG-PCA
Jupyter notebooks for BFG-PCA related simulation and analysis.
Language:Python0 1 00
DanYamamotoEvans.github.io
Daniel Evans-Yamamoto's homepage
Language:CSS0 1 00
Interstellar
INTERSTELLAR: Interpretation, scalable transformation, and emulation of large-scale sequencing reads
Language:Python0 0 00
Monte-Carlo_Sim
Language:Jupyter Notebook0 1 00
paml-tutorial
paml documentation and tutorials
Language:HTML0 0 00
SPDBUE
Jupyter-notebook for scraping protein structures from the Uniprot database.
Language:Jupyter Notebook03
Evans-Yamamoto_et_al_2021
Jupyter notebooks for BFG-PCA related simulation and analysis.
Language:Python2 2 00
Evans-Yamamoto_et_al_2023
The computer codes and control files, defining the settings for the codeml program execution, used in the publication Parallel nonfunctionalization of CK1δ/ε kinase ohnologs following a whole-genome duplication event.
Language:Jupyter Notebook0 1 00
Interstellar
INTERSTELLAR: Interpretation, scalable transformation, and emulation of large-scale sequencing reads
Language:Python15 6 32
RCP-PCR_CRISPR_KO
Analysis codes for high-throughput short read sequencing data. Especially for RCP-PCR experiments on clonal CRISPR KO samples.
Language:Python0 6 01

DanYamamotoEvans/BFG-PCA
Jupyter notebooks for BFG-PCA related simulation and analysis.
Language:Python0 1 00
DanYamamotoEvans/DanYamamotoEvans.github.io
Daniel Evans-Yamamoto's homepage
Language:CSS0 1 00
DanYamamotoEvans/Interstellar
INTERSTELLAR: Interpretation, scalable transformation, and emulation of large-scale sequencing reads
Language:Python0 0 00
DanYamamotoEvans/Monte-Carlo_Sim
Language:Jupyter Notebook0 1 00
DanYamamotoEvans/paml-tutorial
paml documentation and tutorials
Language:HTML0 0 00
DanYamamotoEvans/SPDBUE
Jupyter-notebook for scraping protein structures from the Uniprot database.
Language:Jupyter Notebook03