DanYamamotoEvans

DanYamamotoEvans's Stars

• wdecoster/NanoPlot

  Plotting scripts for long read sequencing data

  Language:Python4361234447

• ponnhide/patchworklib

  Patchwork for matplotlib: A subplot manager for intuitive layouts in matplotlib, seaborn, and plotnine.

  Language:Jupyter Notebook38374725

• ocxtal/minialign

  [IMPORTANT: not for real data analysis, only for algorithm evaluation] fast and accurate alignment tool for PacBio and Nanopore long reads

  Language:C12612139

• brianhie/evolocity

  Evolutionary velocity with protein language models

  Language:Python8361220

• yachielab/QUEEN

  QUEEN: a framework to generate quinable and efficiently editable nucleotide sequence resources

  Language:Python38658

• gcollet/MstatX

  A multiple alignment analyser

  Language:C++20244

• KosuriLab/DropSynth

  Scripts to design DropSynth oligos

  Language:Python16804

• yachielab/Interstellar

  INTERSTELLAR: Interpretation, scalable transformation, and emulation of large-scale sequencing reads

  Language:Python15632

• yachielab/SPADE

  Language:Python14696

• SysBioChalmers/Multi_scale_evolution

  Multi-scale evolution analysis of with aid of protein 3D structures for 332 different yeast species plus 11 fungal species.

  Language:HTML5101

• Landrylab/Evans-Yamamoto_et_al_2021

  Jupyter notebooks for BFG-PCA related simulation and analysis.

  Language:Python2200