wdecoster/NanoPlot

Issues

• I am facing of crashing of Nanoplot

  #386 opened 2 months ago by bhartimittal2976
  1

• [Errno 35] Resource temporarily unavailable

  #385 opened 2 months ago by chanster-j
  2

• Summary Statistics in HTML Report

  #384 opened 3 months ago by yoshinak1
  3

• old version of NanoPlot

  #383 opened 3 months ago by QuentinPerriere
  1

• Number of reads in Nanoplot

  #382 opened 3 months ago by dfv
  3

• Warning messages about pandas ...

  #381 opened 3 months ago by DenisFilloux
  1

• Mean read quality calculation

  #376 opened 5 months ago by alvanuffelen
  5

• NanoPlot 1.43.0 crash

  #380 opened 3 months ago by llesley8
  4

• Limit on plotting long sequences?

  #378 opened 4 months ago by desmodus1984
  3

• NanoPlot and NaoStat Errors: site-packages/Bio/File.py", line 72, in as_handle with open(handleish, mode, **kwargs) as fp: TypeError: expected str, bytes or os.PathLike object, not TextIOWrapper

  #375 opened 4 months ago by HW411
  1

• different NanoStats.txt file

  #372 opened 6 months ago by ScarlettPegany
  4

• would Nanoplot support plotting results for a single contig?

  #379 opened 5 months ago by zhengzhenxian
  2

• multiple input file types

  #377 opened 5 months ago by cherlynty
  1

• #!NanoPlot -o nanoplot_output --fastq_rich barcode04.fastq.gz

  #374 opened 6 months ago by ghislain-ctl
  3

• Report not generated: error tokenizing data

  #373 opened 6 months ago by pclavell
  4

• Adding Q30 and Q50 to summary statistics of NanoPlot report

  #366 opened 6 months ago by Fedeluppi
  4

• Q10 to Q30 quality score thresholds not available in latest NanoPlot version

  #371 opened 6 months ago by sandratra-rab
  3

• NanoPlot not making figures: Error "matplotlib.cm' has no attribute 'cmap_d'

  #370 opened 6 months ago by cavery12
  3

• Not printing readID when run on fastq files

  #368 opened 6 months ago by pclavell
  4

• concatenate the different NanoStats.txt files

  #359 opened 6 months ago by SueFletcher
  1

• Quality Scores

  #355 opened 6 months ago by BerrocalRubio333
  3

• Using barcoded BAM files with no summary

  #356 opened 6 months ago by Ge0rges
  6

• Wrong value for the mean read quality

  #361 opened 6 months ago by DenisFilloux
  1

• NanoPlot 1.42.0 has crashed

  #369 opened 6 months ago by mithunbge06
  2

• Resulting Image（png） Generation Issues

  #360 opened 9 months ago by RADIOMUMM
  12

• Request for detailed explanations of numeric values in NanoPlot report

  #367 opened 7 months ago by KushanManahara
  2

• runs very slowly without "--only-report" option

  #352 opened a year ago by chucknordy
  7

• setup.py problem

  #365 opened 8 months ago by lihaicheng7003
  3

• Confusion regarding arrow formatted files

  #364 opened 8 months ago by TBradley27
  6

• Running NanoPlot on aligned bam file demuxed by Dorado?

  #363 opened 8 months ago by tchrisboles
  2

• Unexpected keyword argument

  #362 opened 8 months ago by axelphilip
  11

• NanoPlot: error: one of the arguments --fastq --fasta --fastq_rich --fastq_minimal --summary --bam --ubam --cram --pickle --feather is required

  #357 opened 9 months ago by katievigil
  4

• minimum read length

  #358 opened 9 months ago by katievigil
  2

• issue/warning?

  #349 opened a year ago by gunjanpandey
  1

• AttributeError: PolyCollection.set() got an unexpected keyword argument 'stat_func'

  #347 opened a year ago by mjfos2r
  2

• ValueError: Invalid character in quality string

  #340 opened a year ago by Sreelekshmi-291
  1

• Web Service not loading in CA

  #354 opened a year ago by jennifergribble-nanopore
  7

• Nanoplot Errno32 Broken pipe

  #353 opened a year ago by teodorabu
  2

• Negative values in Weighted Histograms

  #351 opened a year ago by LiaOb21
  4

• Weigted Histogram

  #350 opened a year ago by AsmaaSamyMohamedMahmoud
  4

• Number of reads from NanoPlot doesn't match samtools

  #341 opened a year ago by KunFang93
  9

• pandas.value_counts is deprecated

  #348 opened a year ago by jodjo86
  1

• Return only the report

  #345 opened a year ago by juanjo255
  3

• Error in running nanoplot .Doesnot produce combined result file.

  #344 opened a year ago by ap1438
  1

• Difference in read quality output from bam and summary file

  #342 opened a year ago by teodorabu
  2

• NanoPlot 1.41.6 has crashed

  #343 opened a year ago by SelfShubham
  1

• Import Error

  #337 opened a year ago by tahir58
  4

• Problem ran NanoPlot

  #336 opened a year ago by gosalone
  7

• Nanoplot iterations produce different outputs

  #339 opened a year ago by ASTR44
  2

• Thank you for your newest github release

  #338 opened a year ago by erinyoung
  1