Import Error
tahir58 opened this issue · 4 comments
tahir58 commented
I have been using NanoPlot successfully. But, suddenly, it is not working and generating the following error:
" ImportError: cannot import name 'SnapGeneIO' from partially initialized module 'Bio.SeqIO' (most likely due to a circular import) (/home/osf/.local/lib/python3.10/site-packages/Bio/SeqIO/init.py) "
I will appreciate the advice/help.
wdecoster commented
Could you try reinstalling the tool in a fresh (conda) environment?
tahir58 commented
I created a new conda environment and installed with pip. It worked. Thanks for help.
How can get rid of the installation in main conda environment?
wdecoster commented
Probably with conda uninstall nanoplot
tahir58 commented
I appreciate all the help!
Regards,
Tahir
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M. Tahir, Ph.D.
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Okanagan Specialty Fruits (OSF)
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Subject: [External] Re: [wdecoster/NanoPlot] Import Error (Issue #337)
Closed #337<#337> as completed.
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