Pinned Repositories
aop
AOP R Package. This package does the following awesome things: 1) Concentration-response analysis using bootstrap metaregression and 2) identifying sufficient causal key events in an AOP.
aop-ontology
Adverse Outcome Pathway Ontology
aop_bayes_nets
AOP Bayesian Networks (AOPBNs)
aop_networks
Repository for AOP Networks (AOPNs)
apecs_vitro
Predicts Estrogenic endocrine disruptors (desktop version -- java gui)
apecs_vivo
Deep learning autoencoder for predicting estrogenic chemicals (using in vivo tested chemicals as ground truth). Similar to APECS(VITRO).
arsenic_mouse_lung_tumor_reanalysis
Bayesian re-analysis of the Waalkes mouse lung tumor data.
bisct
Bayesian Inference for Substance and Chemical Toxicity
DataSciBurgoon.github.io
webpage
toxicophore
DataSciBurgoon's Repositories
DataSciBurgoon/aop-ontology
Adverse Outcome Pathway Ontology
DataSciBurgoon/apecs_vitro
Predicts Estrogenic endocrine disruptors (desktop version -- java gui)
DataSciBurgoon/aop_bayes_nets
AOP Bayesian Networks (AOPBNs)
DataSciBurgoon/aop_networks
Repository for AOP Networks (AOPNs)
DataSciBurgoon/apecs_vivo
Deep learning autoencoder for predicting estrogenic chemicals (using in vivo tested chemicals as ground truth). Similar to APECS(VITRO).
DataSciBurgoon/bisct
Bayesian Inference for Substance and Chemical Toxicity
DataSciBurgoon/DataSciBurgoon.github.io
webpage
DataSciBurgoon/aopxplorer-app
DataSciBurgoon/aopxplorer2
Updated AOPXplorer intended for end-users
DataSciBurgoon/apecs
Autoencoder Predicting Estrogenic Chemical Substances (APECS)
DataSciBurgoon/arsenic_polymorphism
Geospatial human genetic susceptibility, risk and economic impact of arsenic-induced bladder cancer risk at concentrations below the current US EPA Maximum Contaminant Level
DataSciBurgoon/cdk
The Chemistry Development Kit
DataSciBurgoon/cytoscape-app-samples
Cytoscape 3 sample code for App developers.
DataSciBurgoon/damsl
Digital Automated Material Screening Library
DataSciBurgoon/disease_and_decisions
DataSciBurgoon/fraction_unbound
A support vector regression model to estimate the fraction of a chemical that is unbound in blood plasma.
DataSciBurgoon/ggradar
radar charts with ggplot2
DataSciBurgoon/gRain
DataSciBurgoon/gravee
DataSciBurgoon/gravee-1
Good Risk Assessment Values for Environmental Exposures: Estimating Point of Departure (POD) from dose-response data using spline meta-regression.
DataSciBurgoon/gRbase
DataSciBurgoon/Keras-FasterRCNN
keras implementation of Faster R-CNN
DataSciBurgoon/Leaflet.heat
A tiny, simple and fast heatmap plugin for Leaflet.
DataSciBurgoon/niehs_hair_straighteners
A critical re-analysis of a recent (2022) NIEHS paper that claims that hair straightening products, including relaxers, is associated with an increase in uterine cancer.
DataSciBurgoon/ppar-gamma-model
PPAR-gamma deep learning model
DataSciBurgoon/skittles_genotoxicity
A quick analysis to see just how many skittles someone would need to ingest daily to be at risk of genotoxicity given the results of the studies identified by EFSA
DataSciBurgoon/steatosis_aopn
DataSciBurgoon/test1
this is a test
DataSciBurgoon/toxcast_steroidogenesis
DataSciBurgoon/toxicology_ontology
Ontology for the field of toxicology