DocSavage
Interested in datastores (esp. branched versioning), computer graphics (esp. sparse volumes), and deep learning.
Janelia Research CenterAshburn, VA
Pinned Repositories
clio-store
A serverless Connectomics Storage API based on Google Firestore and other scalable services.
appengine-search
Simple full text search demo for Google App Engine
bloog
RESTful Blog for Google App Engine
gitmearepo
Github repo suggestion
rails-authorization-plugin
This plugin provides a flexible way to add authorization to Rails.
sharded_counter
Sharded, memcached counter for Google App Engine
simple3d
Experiments with Taichi Language for 3d EM visualization and image processing.
tagtest
Example of how to use Go's build constraints for conditional compilation.
buildem
CMake and other scripts to help build process of FlyEM software
dvid
Distributed, Versioned, Image-oriented Dataservice
DocSavage's Repositories
DocSavage/simple3d
Experiments with Taichi Language for 3d EM visualization and image processing.
DocSavage/DECODE
This is the official implementation of our publication "Deep learning enables fast and dense single-molecule localization with high accuracy" (Nature Methods)
DocSavage/gvdb-voxels
Sparse volume compute and rendering on NVIDIA GPUs
DocSavage/kaolin-wisp
NVIDIA Kaolin Wisp is a PyTorch library powered by NVIDIA Kaolin Core to work with neural fields (including NeRFs, NGLOD, instant-ngp and VQAD).
DocSavage/neuron-shape-reasoning
PyTorch Implementation of Global Neuron Shape Reasoning with Point Affinity Transformers
DocSavage/badger
Fast key-value DB in Go.
DocSavage/bark
🔊 Text-Prompted Generative Audio Model
DocSavage/CAVEdeployment
DocSavage/course22
The fast.ai course notebooks
DocSavage/instant-ngp-em
Instant neural graphics primitives applied to 3d electron microscopy and connectomics
DocSavage/MeshParty
DocSavage/napari
napari: a fast, interactive, multi-dimensional image viewer for python
DocSavage/napari-chatgpt
A napari plugin to process and analyse images with chatGPT!
DocSavage/neuclease
Tools for computing interactive "cleaves" of agglomerated neuron fragments from a DVID server.
DocSavage/neuprint-python
Python client utilties for interacting with the neuPrint connectome analysis service
DocSavage/neuPrintExplorer
View connectomic data stored in neuPrint
DocSavage/neuVid
Generates neuroscience videos from high-level descriptions using Blender or VVDViewer.
DocSavage/openvdb
OpenVDB - Sparse volume data structure and tools
DocSavage/ossi-website
Website showcasing Janelia Open Science Software Intiative (OSSI) supported software projects and other software developed at Janelia.
DocSavage/path2d
Experiments in path-finding for 2d grayscale image
DocSavage/pbrt-v4
Source code to pbrt, the ray tracer described in the forthcoming 4th edition of the "Physically Based Rendering: From Theory to Implementation" book.
DocSavage/prompt-eng-interactive-tutorial
Anthropic's Interactive Prompt Engineering Tutorial
DocSavage/public-images
DocSavage/py-experiments
DocSavage/scait
Segmentation Correction through AI using Tools
DocSavage/scipy_proceedings
Tools used to generate the SciPy conference proceedings
DocSavage/shard_analysis
Inspect neuroglancer precomputed shard files
DocSavage/tiny-cuda-nn
Lightning fast C++/CUDA neural network framework
DocSavage/vol2mesh
A mesh generating wrapper in Python 3
DocSavage/zarr-python
An implementation of chunked, compressed, N-dimensional arrays for Python.