Tracking Ma viruses and infection dynamics across distinct Ma bloom phases

Repository to accompany "Tracking Microcystis viruses and infection dynamics across distinct phases of a Microcystis-dominated bloom", Wing, et al. 2024.

This code provides the scripts necessary to replicate the analyses described in the paper.

Identify viral contigs

Build high confidence viral otus

Taxonomy and functional annotation of hosts and votus

Analyze diversity and function of viral populations in R