Duke-GCB/GCB-Dockerfiles

Issues

• CircleCI environment not up to date

  #57 opened 2 years ago
  0

• pyyaml vulnerability

  #52 opened 6 years ago
  0

• Tests fail when changed_paths_in_range returns nothing

  #48 opened 7 years ago
  0

• Update documentation for CI-built images

  #46 opened 7 years ago
  3

• trimmomatic image not supported by CI building/deploying

  #45 opened 7 years ago
  0

• deeptools image requires root user

  #44 opened 7 years ago
  1

• Update build-ci script to detect changes to latest

  #40 opened 7 years ago
  1

• singularity run docker://dukegcb/picard - fails to find jar

  #39 opened 7 years ago
  0

• bedgraphtobigwig image downloads non-existent bedGraphToBigWig file

  #37 opened 7 years ago
  0

• Fix permissions for Singularity compatibility

  #34 opened 7 years ago
  0

• Pull access denied for dukegcb/overrepresented_sequence_extract

  #33 opened 6 years ago
  2

• GATK 3.8

  #32 opened 7 years ago
  1

• Revisit automated Docker Hub builds

  #30 opened 7 years ago
  5

• preseq and samtools not setup on dockerhub

  #26 opened 7 years ago
  0

• Update to use LABEL instead of MAINTAINER

  #24 opened 7 years ago
  0

• ssp Dockerfile fails to build

  #23 opened 7 years ago
  2

• Versioning and Rename

  #21 opened 7 years ago
  5

• Include explicit versions when building Docker images

  #5 opened 7 years ago
  3

• Remove wrapper scripts from Dockerfiles

  #4 opened 7 years ago
  0

• Change dockerImageId to dockerPull in tool definitions

  #3 opened 9 years ago
  1

• Upgrade fastqc

  #2 opened 9 years ago
  1