Duke-GCB/iMADS

Issues

• Generate predictions stuck in queued state

  #167 opened 3 years ago by johnbradley
  0

• Prevent apache logs from filling up web container

  #163 opened 3 years ago by johnbradley
  2

• Upgrade to python3

  #158 opened 5 years ago by johnbradley
  0

• pyyaml vulnerability

  #157 opened 5 years ago by johnbradley
  0

• Use http proxy container

  #159 opened 5 years ago by johnbradley
  0

• Move model files off swift storage

  #155 opened 6 years ago by johnbradley
  0

• upgrade circleci config to 2.0

  #147 opened 6 years ago by johnbradley
  0

• Change MAKE PREDICTIONS subtitle

  #150 opened 6 years ago by johnbradley
  0

• Changes to SEARCH GENOME subtitle

  #151 opened 6 years ago by johnbradley
  0

• Update About Page with updated publication information

  #149 opened 6 years ago by johnbradley
  0

• Add binding site sequence to custom predictions BED file

  #145 opened 6 years ago by dleehr
  0

• Additional Binding Site Changes

  #143 opened 6 years ago by johnbradley
  2

• Changes to better convey preference colors

  #138 opened 7 years ago by johnbradley
  1

• allow downloading binding site list

  #139 opened 7 years ago by johnbradley
  1

• Custom Predictions Last Page button INTERNAL SERVER ERROR

  #140 opened 7 years ago by johnbradley
  0

• Default to Include all values

  #133 opened 7 years ago by johnbradley
  0

• psycopg2 install error on circleci

  #137 opened 7 years ago by johnbradley
  0

• Issues with Preference Predictions bound the same amount

  #135 opened 7 years ago by johnbradley
  1

• Error fetching DNA sequence in heatmap detail

  #134 opened 7 years ago by johnbradley
  4

• Make Predictions tab changes

  #125 opened 7 years ago by johnbradley
  1

• CSV generation returns 0's for negative values

  #126 opened 7 years ago by johnbradley
  1

• Apache docker container doesn't remove PID

  #130 opened 7 years ago by dleehr
  0

• Limit size of uploaded DNA sequence

  #123 opened 8 years ago by johnbradley
  0

• Reverse preference colors and only show predictions fully in range

  #121 opened 8 years ago by johnbradley
  0

• Fix logging for apache

  #55 opened 8 years ago by johnbradley
  2

• Add contact address to footer and about page

  #111 opened 8 years ago by dleehr
  1

• Results are not appearing for predictions onuser-supplied sequences

  #118 opened 8 years ago by dleehr
  2

• Sequence Upload - Prevent duplicate sequence names

  #102 opened 8 years ago by johnbradley
  0

• Include documentation for component pieces

  #85 opened 8 years ago by dleehr
  0

• Notes from prediction worker setup

  #54 opened 8 years ago by johnbradley
  3

• Pull in preference data

  #92 opened 8 years ago by johnbradley
  1

• Use rsync instead of ftp for UCSC downloads

  #94 opened 8 years ago by johnbradley
  0

• Setup to install in ansible.

  #27 opened 8 years ago by johnbradley
  3

• Persist tab settings.

  #89 opened 8 years ago by johnbradley
  1

• Provide Instructions for Changing About Tab Content

  #81 opened 8 years ago by johnbradley
  1

• Rename to iMADS

  #84 opened 8 years ago by dleehr
  1

• Change ColorDNA component to support lowercase.

  #58 opened 8 years ago by johnbradley
  1

• Decimal Numbers preventing JSON serialization

  #56 opened 8 years ago by johnbradley
  1

• API for custom predictions and preferences.

  #46 opened 8 years ago by johnbradley
  1

• Typo in .env_sample?

  #48 opened 8 years ago by dleehr
  1

• UCSC FTP needs email in password field for anonymous now

  #41 opened 8 years ago by johnbradley
  1

• Display DNA color coded in Prediction Details

  #37 opened 8 years ago by johnbradley
  1

• Flickering DNA in Predictions Detail dialog

  #35 opened 8 years ago by johnbradley
  0

• Prediction Details labels incorrect for Custom Ranges

  #26 opened 8 years ago by johnbradley
  1

• vacuum not running in docker

  #24 opened 8 years ago by johnbradley
  0

• Add Custom Options to Gene List Dropdown.

  #21 opened 8 years ago by johnbradley
  1

• Click Prediction Cell to view in UCSC genome browser

  #14 opened 8 years ago by johnbradley
  0

• Additional Heapmap changes

  #15 opened 8 years ago by johnbradley
  1

• New column headers for prediction list

  #17 opened 8 years ago by johnbradley
  1

• LastPage button should work

  #12 opened 8 years ago by johnbradley
  0