Pinned Repositories
IR2022
This repository holds scripts to organize and assess VDEQ data for 2022 IR
AssessmentBookdown
BCG
This repository holds scripts and data for the eco69 BCG project.
IntroToShiny
This repository holds scripts and data for an intro to shiny workshop originally given at AMAAB 2017
ProbDash
exploratory data analysis for each prob IR release
2020-08-17-git-emmaJ
AmbientNetworkPlanning
This repository holds scripts for the reevaluation and planning of the ambient site network.
AssessmentTool_2016
This repository hosts scripts and datasets as an online back up and collaboration tool for an assessment tool to link standards layers and monitoring data in R.
BenthicDataQueryApp
This repository holds scripts to run the single and multistation benthic data query tool. The app allows users to query benthic and habitat data directly from the ODS production environment.
BenthicStressorAnalysis
This repository holds data and scripts necessary to run the VDEQ Benthic Stressor Analysis tool. This version restructures the application to query data from CEDS as well as update probabilistic estimates to basin scale.
EmmaVJones's Repositories
EmmaVJones/pinData
EmmaVJones/AmbientNetworkPlanning
This repository holds scripts for the reevaluation and planning of the ambient site network.
EmmaVJones/IR2024
This repository holds data and scripts to assist with the automation of the 2024 Integrated Report.
EmmaVJones/BenthicStressorAnalysis
This repository holds data and scripts necessary to run the VDEQ Benthic Stressor Analysis tool. This version restructures the application to query data from CEDS as well as update probabilistic estimates to basin scale.
EmmaVJones/DEQprojects
This repository holds a bookdown detailing simple reprex for common tasks DEQ employees may want to do in R.
EmmaVJones/FreshwaterProbMonIntegratedReports
EmmaVJones/LandcoverAnalysis
This repository holds scripts for the ATtILA-esque landcover analysis tool. Users run shapefiles of pour points and watershed polygons through script to output 90+ land use and watershed characteristic metrics.
EmmaVJones/AssessmentBookdown
EmmaVJones/testConnection
EmmaVJones/BenthicDataQueryApp
This repository holds scripts to run the single and multistation benthic data query tool. The app allows users to query benthic and habitat data directly from the ODS production environment.
EmmaVJones/fishDistribution
This repository cleans up EDAS fish data for use on the Connect service and builds out a fish distribution mapping application for regional biologists.
EmmaVJones/MacroQAQC
This repository contains scripts and application to run the VDEQ macroinvertebrate QA/QC process.
EmmaVJones/DEQmethods
This repository contains a package of the most common analysis and querying methods developed by DEQ staff.
EmmaVJones/IR2022
This repository holds scripts to organize and assess VDEQ data for 2022 IR
EmmaVJones/IBIdevelopment
This repo contains the methods utilized to develop DEQ's new genus level IBI in partnership with EPA.
EmmaVJones/Enforcement-Dashboard
Scripts to build enforcement project visualization tool
EmmaVJones/ProbDash
exploratory data analysis for each prob IR release
EmmaVJones/WQMdataQueryTool
This repository holds scripts to build the DEQ Water Quality Monitoring Data Query Tool. This shiny app allows users to query data from CEDS ODS, visualize results, and analyze against freshwater probabilistic monitoring parameter estimates to give context to data.
EmmaVJones/SCIcalculation
This repository holds scripts to calculate the Virginia-specific Stream Condition Indexes, the VSCI and VCMPI. Data associated with the project can be found at: https://www.deq.virginia.gov/Programs/Water/WaterQualityInformationTMDLs/WaterQualityMonitoring/ProbabilisticMonitoring/ProbMonDataSources.aspx
EmmaVJones/ProbMon-Integrated-Reports
This repository hold scripts for analysis and reporting on VDEQ Probabilistic Monitoring chapters for the integrated report cycles.
EmmaVJones/VDEQ_BenthicStressorAnalysis
This repository holds data and scripts necessary to run the VDEQ Benthic Stressor Analysis tool. The tool is presented as a shiny app, but users can view the functions behind the analysis in the global.R file.
EmmaVJones/WQMsamplingReport
This repository holds scripts to analyze WQM sampling activities across regions to ensure program needs are being met in a semi-real time report.
EmmaVJones/Pipeline-Summary-Report
This repository holds scripts to generate the daily and weekly summary reports pushed to the pipeline project team from the Connect platform.
EmmaVJones/BenthicStressorAnalysiswithLogi
# VDEQ_BenthicStressorAnalysis This repository holds data and scripts necessary to run the VDEQ Benthic Stressor Analysis tool. The tool is presented as a shiny app, but users can view the functions behind the analysis in the global.R file.
EmmaVJones/eForms
This repository holds scripts and data for the NRSA eforms to report project
EmmaVJones/EDAS-Bioassessment
This repository holds scripts to build the biologist dashboard for bioassessment work every IR cycle.
EmmaVJones/NPSnutrientTrading
This repo holds scripts to pull nutrient data from CEDS and analyze 10 yr statistics for NPS trading project.
EmmaVJones/stationCreation2.0
This repo holds scripts to run a station creation shiny app hosted on Connect service. All data are available on the internal R server. Using this tool, uers only need a lat/lng to discover underlying spatial information about proposed sampling location for entry into CEDS, reducing the manual GIS work required of regional assessors.
EmmaVJones/MacroQA
This repository holds scripts for benthic macroinvertebrate QA method
EmmaVJones/2020-08-17-git-emmaJ