Ethan-Hetrick

I am a bioinformatics scientist at CDC. I mainly develop in Python and Nextflow.

CDCAtlanta, GA

Pinned Repositories

Bioinformatics-Tools
Miscellaneous bioinformatics tools to make things more convenient :D.
Language:Python1 1 00
Donut_Falls_Ethan_Test
Basic workflow for nanopore sequencing data
Language:Nextflow00
hetrick
Trainings for SciComp Team
00
hetrick_scicomp_240501_mkdocs
tutorial for scicomp on mkdocs/github actions
Language:HTML0 0 00
krakenutils
Formats a fasta file for kraken input.
Language:Python0 1 00
nextflow-tests
Canary workflows, test modules, and more!
Language:Nextflow00
samdoras-box
Language:Python0 1 00
tick_surveillance
Bioinformatics pipeline for analysis of amplicon sequencing of tick-associated microbes
Language:Groovy0 0 00
krakenuniq
🐙 KrakenUniq: Metagenomics classifier with unique k-mer counting for more specific results
Language:C++223 16 16644
tools
Python package with helper tools for the nf-core community.
Language:Python238 143 1k188

Ethan-Hetrick/Bioinformatics-Tools
Miscellaneous bioinformatics tools to make things more convenient :D.
Language:Python1 1 00
Ethan-Hetrick/hetrick_scicomp_240501_mkdocs
tutorial for scicomp on mkdocs/github actions
Language:HTML0 0 00
Ethan-Hetrick/krakenuniq
🐙 KrakenUniq: Metagenomics classifier with unique k-mer counting for more specific results
Language:C++0 0 00
Ethan-Hetrick/krakenutils
Formats a fasta file for kraken input.
Language:Python0 1 00
Ethan-Hetrick/samdoras-box
Language:Python0 1 00
Ethan-Hetrick/tick_surveillance
Bioinformatics pipeline for analysis of amplicon sequencing of tick-associated microbes
Language:Groovy0 0 00