/pl-adapt_object_mesh

ChRIS plugin wrapper for adapt_object_mesh from MINC tools

Primary LanguagePythonMIT LicenseMIT

adapt_object_mesh

Version MIT License ci

before and after

pl-adapt_object_mesh is a ChRIS ds plugin wrapper for adapt_object_mesh, a polygonal mesh smoothing program from CIVET. adapt_object_mesh implements Taubin smoothing. pl-adapt_object_mesh runs adapt_object_mesh on every .obj file in its input directory, writing outputs to an output directory, and printing logs to log files which are created next to the output surfaces.

Installation

pl-adapt_object_mesh is a ChRIS plugin, meaning it can run from either within ChRIS or the command-line.

Get it from chrisstore.co

Local Usage

To get started with local command-line usage, use Apptainer (a.k.a. Singularity) to run pl-adapt_object_mesh as a container. To print its available options, run:

apptainer exec docker://fnndsc/pl-adapt_object_mesh adapt_object_mesh_wrapper --help

Example

singularity exec docker://fnndsc/pl-adapt_object_mesh:latest adapt_object_mesh_wrapper --iterations 50 incoming/ outgoing/