FNNDSC / BCH

Fetal-Neonatal Neuroimaging Developmental Science Center

Boston, MA

Pinned Repositories

ami
AMI Medical Imaging (AMI) JS ToolKit
Language:JavaScript705 68 306212
ChRIS_store
Backend for ChRIS plugin apps store
Language:Python11 11 4720
ChRIS_store_ui
UI for the ChRIS Store
Language:JavaScript49 11 11850
ChRIS_ui
UI for ChRIS
Language:TypeScript51 13 353114
ChRIS_ultron_backEnd
Backend for ChRIS
Language:Python31 13 226100
matlab
Matlab Projects and Snippets
Language:MATLAB26 6 419
med2image
Converts medical images to more displayable formats, e.g. NIfTI to jpg.
Language:Python185 10 3856
pman
A process management system written in python
Language:Python19 9 5733
pypx
Python wrapper to interact with a PACS (based off DCMTK and PyDicom)
Language:Python90 11 1625
ubuntu-python3
Source for a slim Ubuntu-based Python3 image
Language:Dockerfile44 7 120

FNNDSC / BCH's Repositories

FNNDSC/ChRIS_ui
UI for ChRIS
Language:TypeScript51 13 353114
FNNDSC/ChRIS_ultron_backEnd
Backend for ChRIS
Language:Python31 13 226100
FNNDSC/pman
A process management system written in python
Language:Python19 9 5733
FNNDSC/CHRIS_docs
Documentation for CHRIS
Language:Shell11 9 1317
FNNDSC/miniChRIS-docker
Easiest way to run ChRIS locally.
Language:Shell7 7 825
FNNDSC/fnndsc
Mono repo for FNNDSC's Javascript projects.
Language:JavaScript6 6 335
FNNDSC/chrisomatic
Setup ChRIS with plugins and powerpointlessness.
Language:Python1 7 103
FNNDSC/miniChRIS-podman
Run ChRIS using Podman or Kubernetes
Language:Shell1 7 14
FNNDSC/pl-image_textRemove
A chris plugin to identify and remove text from images
Language:Python1
FNNDSC/python-chrisapp-template
Batteries-included template for Python ChRIS plugins.
Language:Shell1 7 42
FNNDSC/aiochris
ChRIS python client built on aiohttp
Language:Python0 8 21
FNNDSC/mbox2m365
A small helper module to facilitate use of m365 to send email via an authenticated Outlook/Office365 backend
Language:Python0 7 10
FNNDSC/charts
ChRIS backend on Kubernetes
Language:Smarty1
FNNDSC/chrisproject.org
Website and documentation of ChRIS project
Language:TypeScript8 02
FNNDSC/oxidicom
DICOM receiver for ChRIS backend
Language:Rust
FNNDSC/pflink
A FastAPI application to interact with CUBE and pfdcm
Language:Python7 15
FNNDSC/pfms
A "pf" service for execute inference on uploaded data
Language:Python2
FNNDSC/pl-dicom_dirSend
A ChRIS plugin that sends directories containing DICOM images to a remote PACS server.
Language:Python
FNNDSC/pl-dicom_filter
A ChRIS plugin to filter dicom files by applying filters on dicom headers
Language:Python
FNNDSC/pl-dicom_headerEdit
A DS plugin around pfdicom_tagSub that allows for editing DICOM headers. Most often used to anonymize DICOMs
Language:Python2 0
FNNDSC/pl-dicom_repack
A ChRIS plugin to repack individual slices to a single volume
Language:Python
FNNDSC/pl-dicom_unpack
A ChRIS plugin to unpack dicom volumes into individual slices
Language:Python
FNNDSC/pl-dicommake
Create new DICOM images from an existing DICOM and a new image
Language:Python7 0
FNNDSC/pl-dyworkflow
Separate a parent node into multiple siblings and add the same workflow to each child.
Language:Python2 01
FNNDSC/pl-lld_inference
A ChRIS plugin that runs an inference model to predict landmark points on leg images
Language:Python
FNNDSC/pl-monai_spleenseg
A ChRIS DS plugin that trains a 3D spleen segmentation model based off Project MONAI
Language:Jupyter Notebook1
FNNDSC/pl-spleendata
A ChRIS FS plugin that downloads spleen data for segmentation
Language:Python
FNNDSC/pl-spleendatads
A ChRIS DS data pulling plugin for spleen NIfTI data.
Language:Python
FNNDSC/statuspage
chrisproject.org uptime
Language:JavaScript1 01
FNNDSC/test_chris_AG
testing the python stuff
Language:Shell