Pinned Repositories
ami
AMI Medical Imaging (AMI) JS ToolKit
ChRIS_store
Backend for ChRIS plugin apps store
ChRIS_store_ui
UI for the ChRIS Store
ChRIS_ui
UI for ChRIS
ChRIS_ultron_backEnd
Backend for ChRIS
matlab
Matlab Projects and Snippets
med2image
Converts medical images to more displayable formats, e.g. NIfTI to jpg.
pman
A process management system written in python
pypx
Python wrapper to interact with a PACS (based off DCMTK and PyDicom)
ubuntu-python3
Source for a slim Ubuntu-based Python3 image
FNNDSC / BCH's Repositories
FNNDSC/pypx
Python wrapper to interact with a PACS (based off DCMTK and PyDicom)
FNNDSC/pman
A process management system written in python
FNNDSC/website-old
ChRIS Project Website
FNNDSC/aiochris
ChRIS python client built on aiohttp
FNNDSC/python-chrisapp-template
Batteries-included template for Python ChRIS plugins.
FNNDSC/chrisomatic
Setup ChRIS with plugins and powerpointlessness.
FNNDSC/miniChRIS-podman
Run ChRIS using Podman or Kubernetes
FNNDSC/pypx-listener
A DICOM instance handler for storescp which reorganizes incoming DICOM files for the pypx+pfdcm+ChRIS ecosystem.
FNNDSC/register_image
A ChRIS plugin for registering a 3D moving image to a fixed image, and save the resultant registered moving image as well as the transform matrix.
FNNDSC/chart-testers
Images used in our Helm chart tests
FNNDSC/ChBot
Chbot
FNNDSC/chrs_web
A simple web interface that uses pfchrs to provide the illusion of a web-terminal.
FNNDSC/consumer
A simple FastAPI `consumer` application that constantly polls a `kafka` broker for messages.
FNNDSC/DeepN4
FNNDSC/feta2024_challenge
Code for the segmentation and biometry prediction: FeTa2024
FNNDSC/FeTA_challenge_2024
code for feta challenge
FNNDSC/nvim-configs
Some opinionated nvim configuration files (mostly lua)
FNNDSC/orthanc_svr_ext
A simple Orthanc python plugin based event processing framework to extend Orthanc’s feature set.
FNNDSC/pfchrs
A FastAPI wrapper around/interface to chrs
FNNDSC/pfms
A "pf" service that executes inference on uploaded data
FNNDSC/pl-dyworkflow
Separate a parent node into multiple siblings and add the same workflow to each child.
FNNDSC/pl-emerald
Fetal brain masking using the emerald deep learning model
FNNDSC/pl-monai_spleenseg
A ChRIS DS plugin that can train a 3D spleen segmentation model based off Project MONAI, and also do local or remote inference
FNNDSC/pl-notification
FNNDSC/pl-rclone-copy-template
A repo for creating ChRIS plugins with rclone functionality.
FNNDSC/pl-spleendata
A ChRIS FS plugin that downloads spleen data for segmentation
FNNDSC/pl-spleendatads
A ChRIS DS data pulling plugin for spleen NIfTI data.
FNNDSC/pl-visual-dataset
Mark a ChRIS plugin instance as a public dataset.
FNNDSC/pypx-rs
DICOMweb implementation for pypx-organized DICOM files
FNNDSC/test_chris_AG
testing the python stuff