Big Data Analytics group

Big Data Analytics group at the Institute of Neuroscience and Medicine (INM-1), Forschungszentrum Juelich

Jülich, Germany

Pinned Repositories

celldetection
Scalable Instance Segmentation using PyTorch & PyTorch Lightning.
Language:Python121 7 1820
celldetection-napari
Language:Python4 3 11
neurips22-cell-seg
Language:Python6 3 00
pytiff
Language:Cython11 11 1413
siibra-api
Language:Python4 4 503
siibra-explorer
Language:TypeScript21 9 4173
siibra-python
Software interfaces for interacting with brain atlases - Python client
Language:Python47 8 2639
siibra-tutorials
Tutorials for the siibra toolsuite - software interface for brain atlases.
Language:Jupyter Notebook9 9 31
siibralab
Matlab interface to the siibra toolsuite
Language:MATLAB3 7 202
voluba
Browser based tool for interactive alignment of high-resolution volumes of interest to 3D reference brain models
Language:Vue4 6 620

Big Data Analytics group's Repositories

FZJ-INM1-BDA/celldetection
Scalable Instance Segmentation using PyTorch & PyTorch Lightning.
Language:Python121 7 1820
FZJ-INM1-BDA/siibra-python
Software interfaces for interacting with brain atlases - Python client
Language:Python47 8 2639
FZJ-INM1-BDA/siibra-explorer
Language:TypeScript21 9 4173
FZJ-INM1-BDA/pytiff
Language:Cython11 11 1413
FZJ-INM1-BDA/siibra-tutorials
Tutorials for the siibra toolsuite - software interface for brain atlases.
Language:Jupyter Notebook9 9 31
FZJ-INM1-BDA/neurips22-cell-seg
Language:Python6 3 00
FZJ-INM1-BDA/celldetection-napari
Language:Python4 3 11
FZJ-INM1-BDA/siibra-api
Language:Python4 4 503
FZJ-INM1-BDA/voluba
Browser based tool for interactive alignment of high-resolution volumes of interest to 3D reference brain models
Language:Vue4 6 620
FZJ-INM1-BDA/siibralab
Matlab interface to the siibra toolsuite
Language:MATLAB3 7 202
FZJ-INM1-BDA/HAICon2024-satellite-events
2 4 140
FZJ-INM1-BDA/HBP-connectivity-component
Language:TypeScript1 3 30
FZJ-INM1-BDA/HIBALL-Hackathon-2023
1 2 80
FZJ-INM1-BDA/kg-dataset-previewer
Language:TypeScript1 5 11
FZJ-INM1-BDA/siibra-compose
Language:Python1
FZJ-INM1-BDA/siibra-configurations
Language:Python1 2 391
FZJ-INM1-BDA/tiffs
Language:Python1 3 00
FZJ-INM1-BDA/voluba-mriwarp
Integrate whole brain T1-weighted MRI scans into the anatomical context of the Julich Brain Atlas. Find the developer documentation at https://voluba-mriwarp.readthedocs.io/en/developer_documentation/.
Language:Python1 3 200
FZJ-INM1-BDA/webjugex-iav-plugin
Language:Vue1 6 60
FZJ-INM1-BDA/siibra-schema
Language:Python00
FZJ-INM1-BDA/ebrains_fluentd
Language:Dockerfile2 0
FZJ-INM1-BDA/hbp-fluentd-logger
Language:JavaScript3 0
FZJ-INM1-BDA/iav-dep-test
Language:Python5 0
FZJ-INM1-BDA/iav-plugin-tvb-parameter-visualiser
Language:Svelte5 0
FZJ-INM1-BDA/microdraw
Collaborative vectorial annotation tool for ultra high resolution data.
Language:JavaScript12 0
FZJ-INM1-BDA/ngx-monaco-editor-v2
Monaco Editor component for Angular 2 and Above
Language:TypeScript0 0
FZJ-INM1-BDA/siibra-cli
Command line interface for siibra
Language:Python4 0
FZJ-INM1-BDA/siibra-jugex
Differential analysis of gene expressions in human brain regions
Language:Python7 31
FZJ-INM1-BDA/siibra-toolbox-neuroimaging
siibra toolbox for assignment of neuroimaging signals to brain regions
Language:Python4 5
FZJ-INM1-BDA/webjugex-dependency-tests
Language:JavaScript5 0