/celldetection-napari

Primary LanguagePythonApache License 2.0Apache-2.0

Cell Detection - Napari Plugin

A napari plugin based on PyTorch and the celldetection package.

Installation

Make sure you have PyTorch installed.

pip install git+https://github.com/FZJ-INM1-BDA/celldetection-napari.git

Start

To start napari with the Cell Detection Plugin use this command:

napari -w celldetection-napari

Napari is shipped with example images, e.g. coins.png (File > Open Sample > napari > Coins).

coins demo