FedeGueli

Pinned Repositories

pango-designation
Repository for suggesting new lineages that should be added to the current scheme
Language:Jupyter Notebook1k 80 2.3k98
BA286
BA.2.86 project with Sigal lab
Language:Python0 0 00
pango-designation
Repository for suggesting new lineages that should be added to the current scheme
Language:Python0 0 00
tree
0 1 00
Trees
0 1 00
cov-spectrum-website
A web platform to detect and analyze variants of SARS-CoV-2
Language:TypeScript61 5 52914
LAPIS
An API, a query engine, and a database schema for genomic sequences; currently with a focus on SARS-CoV-2
Language:Kotlin22 4 2816
nextclade
Viral genome alignment, mutation calling, clade assignment, quality checks and phylogenetic placement
Language:Rust219 20 46161
lineage-proposals
Repository to propose and discuss lineages
Language:Python43 8 2.2k3
usher
Ultrafast Sample Placement on Existing Trees
Language:C++123 12 15442

FedeGueli's Repositories

FedeGueli/BA286
BA.2.86 project with Sigal lab
Language:Python0 0 00
FedeGueli/pango-designation
Repository for suggesting new lineages that should be added to the current scheme
Language:Python0 0 00
FedeGueli/tree
0 1 00
FedeGueli/Trees
0 1 00