sars-cov-2-variants/lineage-proposals

Issues

• KP.2.2 + S:N679R, ORF1a:E929G, ORF1a:I3927T (6 in Thailand)

  #1987 opened 3 months ago by Fearuncle
  0

• XDV.1.9+S:30-31del, F32I (14 seqs, 6 countries, 10 with S:A435S)

  #1956 opened 3 months ago by aviczhl2
  11

• XDV.1.7 + S:T22N + S:V62F (4 seqs - Japan and , via GBW, Taiwan, Shanxi)

  #1966 opened 3 months ago by FedeGueli
  2

• Archive: KP.1.1 subbranch with Orf1a:M902V, V3892I (8 sequences, 5 countries) - Not growing

  #1977 opened 3 months ago by Over-There-Is
  0

• KP.1.1 subbranch with Orf1a:A498V, T4161I and Orf3d:Q17*(39, 3 countries)

  #1976 opened 3 months ago by Over-There-Is
  1

• LF.8.1.1+Orf1a:L4391F+Orf6:I33M, S:K478T(rev) (3 seqs, 2 countries)

  #1982 opened 3 months ago by aviczhl2
  0

• KP.4.2+S:S31P,T572I(6 seqs, 4 countries)

  #1986 opened 3 months ago by aviczhl2
  0

• KP.1.1.1+Orf1a:V464I,I2086N,Orf3a:D199E,S:S31del,S:K478T(rev) (3 seqs, 3 countries)

  #1985 opened 3 months ago by aviczhl2
  0

• JN.1*/LF.1.1.1 recombinant(66 seqs, 7 countries)

  #1984 opened 3 months ago by aviczhl2
  0

• LY.1 + ORF1a:S1189R (100 mostly Texas USA)

  #1983 opened 3 months ago by Fearuncle
  0

• KP.2.3 (pre C28714T branch) with ORF1a:Q884E / nsp3_Q66E (130 seqs, 7+4 countries)

  #1959 opened 3 months ago by NkRMnZr
  4

• BA.2 Saltation, 20+ spike mutations (3 seq - one retracted, apparently 1 chronic patient or maybe 2 different patients)

  #1965 opened 3 months ago by ryhisner
  23

• KP.3.1.1+Orf1a:S771I,S:H146Q,S640F (5 seqs, 3 countries)

  #1981 opened 3 months ago by aviczhl2
  0

• JN.1.67.1+S:S60P (20 Seqs, 5 countries)

  #1980 opened 3 months ago by aviczhl2
  0

• KW.1.1+Orf1a:L590F, S:N30H(33 seqs, 7 countries)

  #1979 opened 3 months ago by aviczhl2
  0

• LB.1.3 with S:T76I (22seqs, USA)

  #1960 opened 3 months ago by Memorablea
  2

• KP.3.1.1+ S:F32L + S:T747N (4 in 2 Countries)

  #1978 opened 3 months ago by Fearuncle
  0

• LB.1.4 subbranch with S:A879S(39, 4 countries, mainly in US)

  #1974 opened 3 months ago by Over-There-Is
  4

• KP.3.2.4 subbranch with S:S155I, G184V (34 seqs, 5 countries, mainly found in US)

  #1975 opened 3 months ago by Over-There-Is
  2

• KP.3.1.1+Orf1a:A2994V+S:1143V, Orf8:W45* (3 seqs, 2 countries)

  #1969 opened 3 months ago by aviczhl2
  0

• KP.3.1.1 subbranch with S:R765L and Orf1a:E217K (5 sequences, 3 countries)

  #1972 opened 3 months ago by Over-There-Is
  0

• XDV.1.9 subbranch with S:A435S(8 sequences, 4 countries)

  #1973 opened 3 months ago by Over-There-Is
  1

• JN.1.67.1 subbranch with S:F59S, R346T on G1126A branch (23, 5 countries, mainly found in CN-LN)

  #1971 opened 3 months ago by Over-There-Is
  1

• KP.3.2/LB.1.7+C24421T recombinant with KP.3 spike+ S:1104V rev (4) and S:E340Q (3/4)

  #1942 opened 3 months ago by FedeGueli
  0

• XDV.1+Orf1a:T1844I, A2821V, N:P383S+Orf8:V114I,S:S221L/F(4 seqs, 3 countries, 2 for S:221F)

  #1968 opened 3 months ago by aviczhl2
  0

• JN.1.67.1 / KS.1 Recombinant (RU 7, US 1)

  #1970 opened 3 months ago by Over-There-Is
  0

• LB.1.2.2 (Full quad) + S:S704L (9 US, Mexico)

  #1967 opened 3 months ago by FedeGueli
  0

• KP.4.2 with ORF1a:Q575R (nsp2_Q395R), S:F59S and S:K187S (8 seqs, Nepal, USA)

  #1958 opened 3 months ago by NkRMnZr
  0

• KP.2.14 (with S:22N) + ORF1a:T2183I + ORF1a:S443T + S:A435S (7)

  #1964 opened 3 months ago by Fearuncle
  1

• KP.2.2 with ORF3a:K21N, S:T22N and S:Q613H (5 seqs, 4 countries)

  #1963 opened 3 months ago by NkRMnZr
  2

• KP.3.3 with ORF1a:N434K (nsp2_N254K), ORF1b:D1782N (nsp14_D258N) and S:Q613E (7 seqs, South Korea)

  #1962 opened 3 months ago by NkRMnZr
  1

• KP.3.3 + Orf1a:K2771E branch got 346T and then S:V622F and M:L46F in Japan (3)

  #1944 opened 3 months ago by FedeGueli
  0

• KP.3.3 with ORF1a:E1801K, 13 get S:Q52R(21 seqs,3 countries,mainly found in Japan)

  #1961 opened 3 months ago by Memorablea
  0

• JN.1.4 on T18453C branch with ORF1a:W646L (nsp2_W466L), ORF1a:L3919F (nsp7_L60F), ORF1a:K4348R (nsp10_K95R), ORF1b:E2266I (nsp15_E215I, triple nuc), S:R346T, S:F456L and S:S477D (3 seqs, El Salvador and USA)

  #1938 opened 3 months ago by NkRMnZr
  2

• KP.3.2 Canadian cluster with S:N148D (25)

  #1941 opened 3 months ago by FedeGueli
  1

• LP.1.2+Orf1a:P1207H+S:445P(7 seqs, 2 countries)

  #1957 opened 3 months ago by aviczhl2
  1

• KP.2.3 + S:ins182ERA (ins22108_GAGAGAGCG) [25 seq, Aug 28]

  #1955 opened 3 months ago by ryhisner
  1

• LB.1.2.2 with ORF7a:T39I and S:L456V (7 seqs, Canada)

  #1948 opened 3 months ago by NkRMnZr
  1

• KP.1.1.3+S:G181V(6 seqs, 2 countries)

  #1954 opened 3 months ago by aviczhl2
  0

• LB.1 + S:K478T (rev) + S:E96V emerged in Nepal (7)

  #1953 opened 3 months ago by FedeGueli
  0

• XDV.1 + S:H146Q + S:S704L (3 GBW samples, 2 patients, Japan and Germany

  #1952 opened 3 months ago by FedeGueli
  0

• MC.1+Orf1b:A7V,S:H146Y (4 seqs, 2 countries)

  #1947 opened 3 months ago by aviczhl2
  1

• MD.3.1 subbranch with S:K182E(31 sequences, 8 countries)

  #1951 opened 3 months ago by Over-There-Is
  0

• XDV.1+S:A435S(3 seqs, 3 countries)

  #1949 opened 3 months ago by aviczhl2
  0

• LB.1.2.1+Orf1a:T1682I+S:E1150D (8 seqs, 3 countries)

  #1950 opened 3 months ago by aviczhl2
  0

• MC.10+S:A435S,Orf9b:R47H (11 seqs, 7 countries)

  #1946 opened 3 months ago by aviczhl2
  0

• KP.1.1.5+Orf1a:A2785V,A4357V+S:E748V (7 seqs, 4 countries)

  #1945 opened 3 months ago by aviczhl2
  0

• KP.3.2.3 with S:S256P and S:G72R in a big cluster in Ontario (31)

  #1943 opened 3 months ago by FedeGueli
  0

• KP.3.1.1 got S:P139S adding a novel N137 N Gycan (8, US , Mexico via GBW)

  #1940 opened 3 months ago by FedeGueli
  1

• MC.2 + S:K440R (4 US, 2 states, Scotland)

  #1939 opened 3 months ago by FedeGueli
  0