Pinned Repositories
Ontology-for-Nutritional-Studies
The Ontology for Nutritional Studies (ONS) has been developed as part of the ENPADASI European project (http://www.enpadasi.eu/) with the aim to define a common language and building ontologies for nutritional studies.
joint-food-ontology-wg
This is a repository for documents and issues related to the development of interoperable food related ontologies.
clOTU
A function for plotting word clouds to represent abundance data in microbial ecology.
microbiomeSeq
An R package for microbial community analysis in an environmental context
NuDAR
OBOFoundry.github.io
Metadata and website for the Open Bio Ontologies Foundry Ontology Registry
purl.obolibrary.org
A new system for managing OBO PURLs
Supplementary-to-Butera-et-al.-2019
Supplementary_Vitali_Melanoma
Repository containing code and data for the upcoming manuscript on microbiota and early melanoma severity
TargetMeta_pipeline
The general pipeline for targeted metagenomics data processing (from raw reads to OTUs table and taxonomy) I am using
FrancescoVit's Repositories
FrancescoVit/clOTU
A function for plotting word clouds to represent abundance data in microbial ecology.
FrancescoVit/microbiomeSeq
An R package for microbial community analysis in an environmental context
FrancescoVit/NuDAR
FrancescoVit/OBOFoundry.github.io
Metadata and website for the Open Bio Ontologies Foundry Ontology Registry
FrancescoVit/purl.obolibrary.org
A new system for managing OBO PURLs
FrancescoVit/Supplementary-to-Butera-et-al.-2019
FrancescoVit/Supplementary_Vitali_Melanoma
Repository containing code and data for the upcoming manuscript on microbiota and early melanoma severity
FrancescoVit/TargetMeta_pipeline
The general pipeline for targeted metagenomics data processing (from raw reads to OTUs table and taxonomy) I am using
FrancescoVit/Tutorial_WP4WP3_workshop
Repository with some material used in the ENPADASI WP4-WP3 joint workshop