FredHutch/VISCtemplates

Issues

• Create a medium term vision

  #200 opened 4 months ago by lemireg
  3

• Create more vignettes with best practices for data processing, figures, tables, etc.

  #237 opened 3 months ago by kelliemac
  2

• Guidance on how to generate figures and tables in a for loop (DRY principle)

  #156 opened 6 months ago by kelliemac
  2

• Update git commit hash to short hash within Software-Package-Version-Information R chunk

  #222 opened 3 months ago by brborate
  2

• Add auxillary files (.aux, .toc, etc) to .gitignore

  #219 opened 3 months ago by asatofh
  1

• Abbreviate commit hash in reproducibility table

  #209 opened 3 months ago by kelliemac
  2

• Add quick links in package README for important files

  #241 opened 3 months ago by kelliemac
  0

• Add ref = "" in data package installation chunk

  #240 opened 3 months ago by kelliemac
  0

• Git hash for analysis repo in reproducibility tables

  #239 opened 3 months ago by kelliemac
  0

• Using git tags

  #238 opened 3 months ago by kelliemac
  0

• Move example figure and table code in skeleton.Rmd to a figures and tables vignette

  #236 opened 3 months ago by kelliemac
  0

• Add visc_load_pdata() to visc_report skeleton.Rmd

  #235 opened 3 months ago by kelliemac
  0

• Change name of methods/ folder

  #229 opened 3 months ago by kelliemac
  2

• Automating some of the report QC steps

  #181 opened 5 months ago by kelliemac
  3

• remove name(s) from acknowledgements section for ppl who are not here

  #232 opened 3 months ago by lemireg
  0

• Specify default colors and shapes for figures

  #155 opened 6 months ago by kelliemac
  3

• Update pull request template

  #228 opened 3 months ago by kelliemac
  1

• Create a participant cohort section template

  #158 opened 6 months ago by asatofh
  5

• Add to "How to Contribute" checking git artifact that PDFs knit (and anything else someone should know/do when contributing)

  #227 opened 4 months ago by lemireg
  1

• universal install_git for network drives

  #184 opened 5 months ago by mayerbry
  1

• Suggest nested directory structure

  #225 opened 4 months ago by kelliemac
  0

• Error with install_load_cran_packages() and packages that have not been installed interactively

  #215 opened 4 months ago by kelliemac
  0

• Creates README.Rmd instead of README.md in new directory

  #214 opened 4 months ago by lemireg
  3

• Release 1.3.2 patch release

  #217 opened 4 months ago by slager
  0

• Reconcile differences between visc_empty and visc_report skeleton.Rmd files

  #203 opened 4 months ago by kelliemac
  0

• Make sure R packages leveraged using :: notation are included in reproducibility table

  #211 opened 4 months ago by kelliemac
  0

• Include standard R and R package references in template?

  #210 opened 4 months ago by kelliemac
  0

• Fix file names referenced in generic report methods templates

  #208 opened 4 months ago by kelliemac
  0

• Autofilling / providing guidance on updating fields in project DESCRIPTION

  #207 opened 4 months ago by kelliemac
  0

• Release VISCtemplates 1.3.1 patch release

  #206 opened 4 months ago by slager
  0

• Release VISCtemplates 1.3.0

  #201 opened 4 months ago by slager
  0

• ICS template

  #198 opened 4 months ago by slager
  0

• Spring cleaning for template.tex

  #161 opened 4 months ago by kelliemac
  0

• Update SCHARP logo

  #171 opened 4 months ago by asatofh
  0

• Additional mock datasets for bama, nab, adcc, etc.

  #194 opened 4 months ago by kelliemac
  1

• Update authors in description file

  #180 opened 4 months ago by kelliemac
  1

• insert_break() not working for Word output

  #162 opened 5 months ago by kelliemac
  5

• Reminder to tweak snapshots upload method

  #170 opened 5 months ago by slager
  1

• Warnings when knitting report templates

  #174 opened 5 months ago by slager
  1

• add tests 😬

  #136 opened 5 months ago by mayerbry
  8

• Reorganize/rename code files nested under R/

  #135 opened 5 months ago by kelliemac
  1

• Error compiling reports to pdf in recent version of RStudio

  #150 opened 5 months ago by kelliemac
  3

• skeleton.Rmd file not being created when using use_visc_report()

  #157 opened 5 months ago by lemireg
  7

• Auto-generate non-empty (e.g., BAMA) report skeletons (PDF and docx) using GitHub actions

  #142 opened 5 months ago by kelliemac
  1

• Specify approved locations for installing data packages

  #145 opened 5 months ago by kelliemac
  1

• Placeholder issue for bugfix in visc_load_pdata() user interface

  #167 opened 5 months ago by slager
  1

• Long runtime for package skeleton Github action

  #165 opened 5 months ago by slager
  3

• improve visc_load_pdata() error message when data package is not installed

  #151 opened 6 months ago by slager
  0

• change master to main

  #140 opened 7 months ago by mayerbry
  1

• add visc_load_pdata() function

  #146 opened 7 months ago by valduran18
  1