Pinned Repositories
cellranger_211_mirror
Mirror of Cell Ranger version 2.1.1 from 10X Genomics which we used in our scSNV manuscript
emptydrops
Python implementation of emptydrops() in CellRanger v3.0.2
flammkuchen
Flexible HDF5 saving/loading library forked from deepdish (University of Chicago) and maintained by the Portugues lab
RNASequel
scrna2019
supporting code for the multinomial single cell RNA-Seq paper
scsnv
scSNV Mapping tool for 10X Single Cell Data
sctx
scRNA-seq utlities for deconvoluting transplant samples
SimpleTidy_GeneCoEx
A simple gene co-expression analyses workflow powered by tidyverse and graph analyses
octopus
Bayesian haplotype-based mutation calling
GWW's Repositories
GWW/scsnv
scSNV Mapping tool for 10X Single Cell Data
GWW/RNASequel
GWW/sctx
scRNA-seq utlities for deconvoluting transplant samples
GWW/cellranger_211_mirror
Mirror of Cell Ranger version 2.1.1 from 10X Genomics which we used in our scSNV manuscript
GWW/emptydrops
Python implementation of emptydrops() in CellRanger v3.0.2
GWW/flammkuchen
Flexible HDF5 saving/loading library forked from deepdish (University of Chicago) and maintained by the Portugues lab
GWW/scrna2019
supporting code for the multinomial single cell RNA-Seq paper
GWW/SimpleTidy_GeneCoEx
A simple gene co-expression analyses workflow powered by tidyverse and graph analyses