GWW/scsnv

Issues

• Stuck at first step of the tutorial

  #34 opened 4 months ago by chungsai
  0

• Error at scsnv map step

  #35 opened 8 months ago by DLuong79
  6

• Barcode files not generated when using variable as folder name

  #33 opened 10 months ago by DLuong79
  2

• MacOS Compatibility

  #32 opened a year ago by wgsim
  4

• Installation error: configure: error: /bin/sh ./config.sub unknown-Darwin failed

  #31 opened a year ago by nash5202
  1

• Installation error: checking whether the C compiler works... no

  #30 opened a year ago by nash5202
  0

• Add Per-UMI Read Coverage Information

  #26 opened 2 years ago by Alf-Kenz
  5

• error in scsnvmisc cells

  #29 opened 2 years ago by monoplasty
  7

• Error in scsnvmisc cells -h

  #28 opened 2 years ago by monoplasty
  1

• multiple errors when running this step "python setup.py install"

  #27 opened 2 years ago by monoplasty
  1

• `scsnv collapse` SegFaulting

  #24 opened 2 years ago by Alf-Kenz
  14

• Download RNA editing annotation file REDIportal

  #25 opened 2 years ago by Qirong-Lin
  2

• error when running scsnvmisc

  #23 opened 2 years ago by Qirong-Lin
  5

• Suggest Reference

  #22 opened 2 years ago by Alf-Kenz
  4

• How do I...

  #21 opened 2 years ago by gitUser128954
  1

• Questions about mutations detected from 10X scRNA data

  #20 opened 2 years ago by ttt-404
  2

• error when runing "python setup.py install"

  #19 opened 2 years ago by sirasris
  4

• question about -V3_5P

  #18 opened 2 years ago by ttt-404
  3

• About building the index

  #17 opened 2 years ago by Pedramto89
  9

• collapse using cellranger bam

  #16 opened 2 years ago by ttt-404
  4

• error in scsnvmisc cells

  #15 opened 2 years ago by ttt-404
  3

• Docker image or singularity file of the scsnv

  #14 opened 2 years ago by chuiqin
  1

• Question about the output of scsnvmisc annotate

  #13 opened 2 years ago by chuiqin
  5

• The error occurred: bam shouldn't be empty

  #12 opened 2 years ago by chuiqin
  5

• Miss I1 fastq file

  #11 opened 2 years ago by chuiqin
  1

• question about the output file

  #10 opened 3 years ago by earn97
  1

• error in scsnvmisc

  #9 opened 3 years ago by earn97
  3

• error in scsnv index

  #8 opened 3 years ago by hjistb
  2

• Library type selection ( and no 'pileup_passed_snvs.txt.gz' generated)

  #7 opened 3 years ago by MarcusLCC
  7

• 'make' failed when compiling

  #6 opened 3 years ago by MarcusLCC
  7

• Can't read Gene Groups(scsnv_index_genes.txt.gz)

  #5 opened 3 years ago by ttab963
  15

• Collapsing seg fault?

  #4 opened 4 years ago by cnk113
  1

• C++ compilation issue

  #3 opened 4 years ago by omansn
  3

• Ability to use w/o UMI?

  #2 opened 4 years ago by cnk113
  3