GabrielGaugain

GabrielGaugain's Stars

• wmglab-duke/ascent

  ASCENT (Automated Simulations to Characterize Electrical Nerve Thresholds): A pipeline for sample-specific computational modeling of electrical stimulation of peripheral nerves

  Language:Python169

• nrv-framework/NRV

  NeuRon Virtualizer (NRV)

  Language:Jupyter Notebook52

• bscoventry/Practical-Bayesian-Inference-in-Neuroscience-Or-How-I-Learned-To-Stop-Worrying-and-Embrace-the-Dist

  This repository is a supplement to Coventry and Bartlett's tutorial on using Bayesian methods in neuroscience studies using PyMC.

  Language:Python51

• petersenpeter/CellExplorer

  CellExplorer is a graphical user interface, a standardized processing module and data structure for exploring and classifying single cells acquired using extracellular electrodes.

  Language:MATLAB9658

• AllenInstitute/All-active-Workflow

  Creating the code base for All-active Model generation written on top of Bluepyopt

  Language:Python153

• ageron/handson-ml2

  A series of Jupyter notebooks that walk you through the fundamentals of Machine Learning and Deep Learning in Python using Scikit-Learn, Keras and TensorFlow 2.

  Language:Jupyter Notebook27.7k12.7k

• neurodsp-tools/neurodsp

  Digital signal processing for neural time series.

  Language:Python27961

• meg-simula/mri2fem-lectures

  Lecture series on From magnetic resonance imaging to finite element simulation

  Language:TeX16

• TorgeW/TMS-Neuro-Sim

  Language:AGS Script21

• melizalab/quickspikes

  Fast spike detection and extraction for Python

  Language:Python328

• alejoe91/MEArec

  Fast and customizable of extracellular recordings on MEA

  Language:AGS Script41

• NeuralEnsemble/ephyviewer

  Simple viewers for ephys signals, events, video and more

  Language:Python5113

• SpikeInterface/spikeinterface

  A Python-based module for creating flexible and robust spike sorting pipelines.

  Language:Python495188

• neoanalysis/NeoAnalysis

  Language:Python256

• samuelgarcia/spikeinterface

  Meta-package of SpikeInterface's entire family of packages (spikeextractor, spiketoolkit, spikesorters, spikewidgets, spikecomparison).

  Language:Python1

• Eden-Kramer-Lab/spectral_connectivity

  Frequency domain estimation and functional and directed connectivity analysis tools for electrophysiological data

  Language:Python12143

• kwagstyl/cortical_layers_tutorial

  Workshop for using BigBrain atlas of cortical layers

  Language:Jupyter Notebook111

• passalis/arduino-tdcs

  tDCS using arduino

  Language:Python187

• ohsnapitsnathan/brainkit

  An open-source, Arduino based platform for tDCS, tACS, and analysis of neurophysiological data

  Language:Python3514

• brainglobe/brainrender

  a python based software for visualization of neuroanatomical and morphological data.

  Language:Python53875

• FKSkinnerLab/HumanL5NeuronModel

  Code associated with the publication, "A novel human neuron model reveals the influence of inter-species h-channel kinetic differences on resonant responses"

  Language:C22

• nschloe/pygmsh

  :spider_web: Gmsh for Python

  Language:Python842161

• nschloe/tikzplotlib

  :bar_chart: Save matplotlib figures as TikZ/PGFplots for smooth integration into LaTeX.

  Language:Python2.4k211

• ModelDBRepository/267618

  Hybrid NEURON-COMSOL sciatic nerve model with extracellular TIME stimulation (Xie et al, accepted)

  Language:Python22

• BlueBrain/EModelRunner

  Runs cells from stand-alone packages.

  Language:Python156

• dhaitz/mplcyberpunk

  "Cyberpunk style" for matplotlib plots

  Language:Python1.7k69

• rougier/matplotlib-tutorial

  Matplotlib tutorial for beginner

  Language:Python2.9k808

• annoviko/pyclustering

  pyclustering is a Python, C++ data mining library.

  Language:Python1.2k249

• pydata/numexpr

  Fast numerical array expression evaluator for Python, NumPy, Pandas, PyTables and more

  Language:Python2.2k207

• JustasB/BlenderNEURON

  Exports 3D structure and activity from NEURON simulator to Blender

  Language:Python277