Pinned Repositories
bcftools
This is the official development repository for BCFtools. To compile, the develop branch of htslib is needed: git clone --branch=develop git://github.com/samtools/htslib.git htslib
RS3
A library interfacing libs3 to R
rusqlite
Ergonomic bindings to SQLite for Rust
SEW
SEW
slurm-drmaa
DRMAA for Slurm imported from PSNC SVN
ukb-pret
ultrajson
Ultra fast JSON decoder and encoder written in C with Python bindings
variantkey
Numerical Encoding for Human Genetic Variants
vcfanno
annotate a VCF with other VCFs/BEDs/tabixed files
wecall
Fast, accurate and simple to use command line tool for variant detection in NGS data.
Genomics plc's Repositories
Genomicsplc/variantkey
Numerical Encoding for Human Genetic Variants
Genomicsplc/ukb-pret
Genomicsplc/SEW
SEW
Genomicsplc/rusqlite
Ergonomic bindings to SQLite for Rust
Genomicsplc/bcftools
This is the official development repository for BCFtools. To compile, the develop branch of htslib is needed: git clone --branch=develop git://github.com/samtools/htslib.git htslib
Genomicsplc/cgat-core
Core functionality of the CGAT code
Genomicsplc/poetry
Python dependency management and packaging made easy.
Genomicsplc/sbpack
Command line utility to pack and upload/download CWL to/from SB powered platform
Genomicsplc/SoftEtherVPN_Stable
Cross-platform multi-protocol VPN software. This repository is officially managed by Daiyuu Nobori, the founder of the project. Pull requests should be sent to the master repository at https://github.com/SoftEtherVPN/SoftEtherVPN.
Genomicsplc/ultrajson
Ultra fast JSON decoder and encoder written in C with Python bindings
Genomicsplc/ansible-style-guide
Style guide for writing Ansible
Genomicsplc/arvados
An open source platform for managing and analyzing biomedical big data
Genomicsplc/bats-core
Bash Automated Testing System
Genomicsplc/bioconda-recipes
Conda recipes for the bioconda channel.
Genomicsplc/cromwell
Scientific workflow engine designed for simplicity & scalability. Trivially transition between one off use cases to massive scale production environments
Genomicsplc/dehydrated
letsencrypt/acme client implemented as a shell-script – just add water
Genomicsplc/docker-ci-dind
Docker-in-docker container to run Gitlab CI jobs (PUBLIC)
Genomicsplc/flare
The flare program performs local ancestry inference
Genomicsplc/instant
A std::time::Instant replacement that works on WASM too.
Genomicsplc/pandas
Flexible and powerful data analysis / manipulation library for Python, providing labeled data structures similar to R data.frame objects, statistical functions, and much more
Genomicsplc/poetry-core
Poetry PEP 517 Build Backend & Core Utilities
Genomicsplc/python-profiling-tutorial
Profiling Tutorial
Genomicsplc/rust-bindgen
Automatically generates Rust FFI bindings to C (and some C++) libraries.
Genomicsplc/serde_rusqlite
Serialize/deserialize rusqlite rows
Genomicsplc/singularity
SingularityCE is the Community Edition of Singularity, an open source container platform designed to be simple, fast, and secure.
Genomicsplc/terraform-provider-dns
Terraform DNS provider
Genomicsplc/testcafe-reporter-xunit
This is the xUnit reporter plugin for TestCafe.
Genomicsplc/wasm-bindgen
Facilitating high-level interactions between Wasm modules and JavaScript
Genomicsplc/wasmer-js
Monorepo for Javascript WebAssembly packages by Wasmer
Genomicsplc/yaml-rust
A pure rust YAML implementation.