GergelyTuri

GergelyTuri's Stars

• public-apis/public-apis

  A collective list of free APIs

  Language:Python319k4.2k63733.9k

• AdaptiveMotorControlLab/CEBRA

  Learnable latent embeddings for joint behavioral and neural analysis - Official implementation of CEBRA

  Language:Python920353877

• probml/dynamax

  State Space Models library in JAX

  Language:Python7012719081

• ebatty/MathToolsforNeuroscience

  Materials for Mathematical Tools for Neuroscience course at Harvard (Neurobio 212)

  Language:Jupyter Notebook44225462

• MilesCranmer/awesome-ml-demos

  Curated list of interactive ML demos

  3399112

• danbider/lightning-pose

  Accelerated pose estimation and tracking using semi-supervised convolutional networks.

  Language:Jupyter Notebook23647035

• AllenInstitute/deepinterpolation

  Language:Python210113650

• denisecailab/ezTrack

  Free, platform independent, behavior tracking software.

  Language:Jupyter Notebook123127041

• sn-lab/MouseGoggles

  A dual-SPI display mouse VR headset, powered by Raspberry Pi and the Godot game engine

  Language:Jupyter Notebook847109

• coursekevin/svise

  Accompanying code for "State Estimation of a Physical System without Governing Equations"

  Language:Python773514

• dattalab/keypoint-moseq

  Language:Python771513428

• pyrates-neuroscience/PyRates

  Open-source, graph-based Python code generator and analysis toolbox for dynamical systems (pre-implemented and custom models). Most pre-implemented models belong to the family of neural population models.

  Language:Python7410328

• LernerLab/GuPPy

  Guided Photometry Analysis in Python, a free and open-source FP analysis tool.

  Language:Python6569711

• HarveyLab/mouseVR

  Harvey Lab miniaturized mouse VR rig hardware for virtual navigation and decision-making tasks

  Language:C3917811

• mlfpm/deepof

  DeepLabCut based data analysis package including pose estimation and representation learning mediated behavior recognition

  Language:Python395506

• lnferreira/time_series_clustering_via_community_detection

  Code used in the paper "Time Series Clustering via Community Detection in Networks"

  Language:R37307

• ransona/ROIMatchPub

  Match suite2p ROIs between imaging sessions

  Language:MATLAB23645

• thosvarley/OPyN

  A Python package for construction and analysis of ordinal partition networks from time-series data.

  Language:HTML16102

• ThomasAkam/Point_Grey_Bonsai_multi_camera_acquisition

  Configurable acquisition from multiple FLIR/Point Grey camera using Bonsai and Python to h264 compress the video on the GPU.

  Language:Python13002

• neurodroid/gnoom

  A collection of virtual-reality tools for biomedical research

  Language:Python8707

• SeanNobel/DeepLabCut_cuedFC

  Analyze freezing rate and other behavioral aspects of animals, using data from DeepLabCut. Especially optimized for cued fear conditioning.

  Language:Python7131

• jf-lab/convert-ffii

  Scripts to convert .ffii FreezeFrame files to .webm

  Language:Python4611

• dlevenstein/Sleep-State-Score

  State Scoring, this has been moved to https://github.com/buzsakilab/buzcode/tree/master/preprocessing/behavioralStateDetection

  Language:MATLAB31

• funkelab/i2k_gunpowder_tutorial

  Gunpowder tutorial given at the I2K 2020 conference

  Language:Jupyter Notebook3211

• simslab/Neurite_FISH_Quant

  Python code for quantification of FISH puncta in neurites

  Language:Jupyter Notebook2301

• GergelyTuri/nsf-reu

  NSF REUsite at NYSPI

  Language:SCSS1200

• GoncalvesLab/HeadFixedTreadmill

  This repository contains files to build a head-fixed linear treadmill apparatus and to run related data analysis.

  Language:MATLAB1

• harvardschoolofmouse/HSOMbehaviorSuite

  Contains behavioral control files for use with MATLAB 2021B+ and Arduino

  Language:MATLAB1100

• KasparP/TwoColorUnmixing

  Code for correlation analysis of two-color imaging data with spectral unmixing

  Language:MATLAB1201

• MicTott/FiberFlow_old

  A Streamlit application for visualizing, processing, and analyzing fiber photometric data from .csv files.

  Language:Python10