Gogis0
Bioinformatics researcher focused on compressed data structures for pangenomics.
@fmfi-compbio Bratislava, Slovakia
Pinned Repositories
maria
ALCS
chordless-graphs-generator
Counting chordless cycles in undirected graphs
fishersignatures
Offline handwritten signature recognition based on LDA
lazy_phoni
Computing matching statistics with compressed data structures
PFP
Rust implementation of prefix-free parsing. Mostly for Rust-learning purposes. WIP.
Quicksort-in-GNU-Assembler
A small school project for System Programming class
rho-index
An evolved r-index for finding MEMs.
ShapedSlp
SLP encodings that support substring extraction
Gogis0's Repositories
Gogis0/chordless-graphs-generator
Counting chordless cycles in undirected graphs
Gogis0/fishersignatures
Offline handwritten signature recognition based on LDA
Gogis0/PFP
Rust implementation of prefix-free parsing. Mostly for Rust-learning purposes. WIP.
Gogis0/ALCS
Gogis0/barcode-demultiplexing
Clustering DNA reads by barcodes from raw reads. Old code written for my master-thesis.
Gogis0/bioinformatics-algorithms-book-notes
My notes for the book Bioinformatics Algorithms by Enno Ohlebusch
Gogis0/BWT-Tunneling
Gogis0/cat
HW: An implementation of Unix cat.
Gogis0/CSFD-parser
Parser for movie pages and search on CSFD.cz
Gogis0/dotfiles
An attempt to organize my configs
Gogis0/Gogis0
Config files for my GitHub profile.
Gogis0/haskell-exam-grader
Gogis0/lazy_phoni
Computing matching statistics with compressed data structures
Gogis0/markdown-cv
a simple template to write your CV in a readable markdown file and use CSS to publish/print it.
Gogis0/privacy-questionnaire
Gogis0/rho-index
An evolved r-index for finding MEMs.
Gogis0/ShapedSlp
SLP encodings that support substring extraction
Gogis0/BigRePair
A tweaked fork of Giovanni's BigRePair (https://gitlab.com/manzai/bigrepair).
Gogis0/file-system
HW: An implementation of a Unix-like file system.
Gogis0/grammar_improved_index
Grammar Index
Gogis0/lz77-to-slp
Fast and space-efficient conversion from the LZ77 parsing to a grammar
Gogis0/malloc
HW: An implementation of Unix malloc.
Gogis0/master-thesis
Google Scholar somehow omitted my old master thesis, so I put it here, if anyone's curious.
Gogis0/nostalgia-code
Gogis0/old-hw
Old code made for homeworks.
Gogis0/pfp_wg
Gogis0/recompression
Recompression technique of Artur Jez
Gogis0/sdsl-lite
Succinct Data Structure Library 2.0
Gogis0/tiny-test-data
Super small biological datasets for unit testing
Gogis0/wright-fisher-interactive