GreenleafLab/brainchromatin

Issues

• New fragment file from cellranger-atac-2?

  #9 opened 3 years ago by cnk113
  5

• About brain region (Brodmann area)

  #15 opened 2 years ago by koh2ng0
  0

• Pseudotime measurements for glutamatergic neurons

  #8 opened 3 years ago by ryandhindsa
  2

• Cell Annotations for Figure 2G (scRNA-seq)

  #14 opened 2 years ago by Lindsey8383
  0

• Seurat Projection Encountered Issues

  #7 opened 3 years ago by SammiLyu
  8

• matching gene-cre link k-means clusters to annotated cell-types

  #13 opened 2 years ago by naumanjaved
  2

• Question about repetitive peaks

  #12 opened 2 years ago by Drizzle-Zhang
  0

• TF Enrichment linked peaks

  #11 opened 3 years ago by waltno
  1

• Mismatch in multiome_cluster_names.txt

  #10 opened 3 years ago by MagpiePKU
  1

• Fragments file availability for multiome?

  #2 opened 4 years ago by cnk113
  3

• failed to download Multiome CellRanger output folders

  #5 opened 3 years ago by rdf1993
  4

• The index file is older than the data file

  #6 opened 3 years ago by rdf1993
  1

• multiome ATAC cluster annotation missing

  #4 opened 3 years ago by alhafidzhamdan
  1

• Fragments file availability for scATAC?

  #3 opened 3 years ago by yimingsun12138
  1

• Question about multimodal data

  #1 opened 4 years ago by jacobhepkema
  6