GregorySchwartz/too-many-cells

error: "runInteractiveProcess:exec:does not exist"

lihpsg opened this issue · 3 comments

lihpsg commented

Encountered the following error when running "make-tree":

"twopi: runInteractiveProcess: runInteractiveProcess: exec: does not exist (No such file or directory)"

The command I used was:
~/.local/bin/too-many-cells make-tree -m ~/too-many-cells/filtered_feature_bc_matrix --draw-collection "PieRing" -- output out >clusters.csv

GregorySchwartz commented

You need to install the graphviz dependency (https://gregoryschwartz.github.io/too-many-cells/#org08d8d97).

  • 👍1
GregorySchwartz commented

Please re-open if this answer did not solve your question!

lihpsg commented

Thank! installation of graphviz addressed this issue.