HUPO-PSI/psi-mod-CV

Issues

• How to describe proteins conjugated with thioredoxin peroxidase?

  #76 opened 10 months ago
  0

• NTR: ubiquitinylated cysteine

  #75 opened a year ago
  0

• NTR: isgylated L-lysine

  #74 opened a year ago
  0

• MOD:00312 'S-myristoyl-L-cysteine' hypothetical or natural?

  #73 opened 2 years ago
  1

• Revisions needed for MOD:00647 "monoacetylated L-serine" and MOD:02080 "diacetylated-L-serine"

  #72 opened 2 years ago
  0

• Missing PSI-MS-label on MOD:01458

  #71 opened 3 years ago
  2

• UniProt PTM references are not written as CURIEs

  #68 opened 2 years ago
  2

• some "not great" ntrs from the iedb

  #67 opened 3 years ago
  3

• NTR: N-methyl-L-valine

  #65 opened 3 years ago
  1

• Consider using property-value for annotated properties

  #63 opened 3 years ago
  13

• NTR: glutaminylated residue

  #62 opened 3 years ago
  2

• Add obofoundry topic to repo metadata

  #61 opened 3 years ago
  3

• ProForma needs a generic MOD term for isoasp crosslinked peptides

  #60 opened 3 years ago
  0

• Collagen-related mods

  #59 opened 4 years ago
  1

• D-amino acids

  #58 opened 4 years ago
  3

• missing character

  #57 opened 4 years ago
  3

• Duplicate Names for sugars

  #54 opened 4 years ago
  4

• Deorphanize or Deprecate Terms Rooted at MOD:00003 and MOD:00947

  #53 opened 4 years ago
  1

• Heavy Isotope Labeled PTMs

  #50 opened 4 years ago
  1

• Mass Differences... Are they a transitive property?

  #47 opened 4 years ago
  10

• depracated obo.xml

  #41 opened 4 years ago
  11

• Our OBOFoundry link points to an old version of the PSI-MOD.obo file.

  #38 opened 4 years ago
  4

• AVERAGE Itraq4PLEX MOD

  #31 opened 4 years ago
  2

• follow up on SF ticket re proline isomerization

  #28 opened 4 years ago
  10

• NTR: urmylation

  #26 opened 4 years ago
  6

• SARS-Cov-2 Spike glycosylations needed from UniMod

  #25 opened 4 years ago
  1

• Duplicated short label

  #23 opened 4 years ago
  2

• UniMod vs Unimod

  #22 opened 4 years ago
  4

• Missing mass values?

  #20 opened 4 years ago
  4

• Ammonium?

  #18 opened 5 years ago
  3

• Replace "contains: " with "relationship: contains"

  #16 opened 5 years ago
  1

• Crossreference with GNO

  #15 opened 4 years ago
  2

• Add “S-CysGly” modification (monoisotopic +176.026)

  #13 opened 5 years ago
  2

• Systematic Names

  #12 opened 5 years ago
  0

• Adding terms to psi-mod-CV to link modifications with amino acids

  #11 opened 5 years ago
  3

• Review old tickets on SF for relevant items

  #10 opened 4 years ago
  1

• NTR: glutaminylation ?

  #9 opened 5 years ago
  15

• PSI-MOD.obo.xml not up to date

  #5 opened 4 years ago
  5

• Update from pride team with more annotations

  #3 opened 7 years ago
  3

• Minor suggestion: append -CV to the repo

  #2 opened 7 years ago
  0