Scripts to reproduce the analyses and figures in Cole et al. 2023 "In Review" pre-print ( https://doi.org/10.21203/rs.3.rs-3854371/v1 ) and subsequent revision for publication in Frontier in Zoology
- Cole.etal.AtlasNve.formatData_publish.R = script 1 for loading cellranger-processed count matrices and generating Seurat object for analysis
- Cole. etal.AtlasNv2.Analysis_publish.R = script 2 for analysing data set and data partitions
- Cole.etal.AtlasNvs.Figures_publish.R = script 3 for generating figures included in mansucript
- Cole.etal.AtlasNvs.Figures_publishRevision.R = script 4 for generating figures included in revisions