HediaTnani

Staff Scientist I @ LIBD | Data Science enthusiast | R & Python passionate | R-Ladies Tunis Co-founder

Lieber Institute for Brain DevelopmentBaltimore

Pinned Repositories

30DayChartChallenge
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ABN_Covid_19Workgroup
Involved in Mapping, variant calling and Phylogenetics
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Bio-containers
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BioNextflow
Library of biological tools for Nextflow
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biostatistics
A free biostatistics reading list :)
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crs19-monitor
Monitor of SARS-CoV-2 variants and mutations in Europe
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gradual_shiny
Workshop introducing Shiny programming concepts
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Leishmania
functions and documents
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Machine_Learning_with_Python
An introduction to Machine Learning with Python and SciKit
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meetup-presentations_brisbane
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HediaTnani's Repositories

HediaTnani/biostatistics
A free biostatistics reading list :)
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HediaTnani/-STOCK-PREDICTION
Developed a stock prediction model using LSTM neural networks, forecasting future prices based on historical data.Employed TensorFlow for data processing and model training, achieving promising results.
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HediaTnani/aws-for-bioinformatics
AWS for Bioinformatics Researchers
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HediaTnani/bioflow
HediaTnani/BMBL-analysis-notebooks
A collection of bioinformatics data analysis notebooks focused on providing examples of current best practices in single-cell analysis.
HediaTnani/bpaml-sessions
This is a repository for all the session summaries from the Beginners' Python and Machine Learning held in Brisbane.
HediaTnani/cactus
Chromatin ACcessibility and Transcriptomics Unifying Software
HediaTnani/cellranger-arc_NF
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HediaTnani/generative-ai
All codes related to Generative AI
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HediaTnani/genetic_burden_pipeline
Scripts and tools to estimate the genetic burden as part of my first aim of my thesis.
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HediaTnani/GenSeqWorkshop2024
Genomic Sequencing Workshop - Unlocking the Potential of MinION
HediaTnani/ggplot_extensions_adventR
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HediaTnani/GSMM_Leishmania
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HediaTnani/GWAS-study-
Genome Wide association study
HediaTnani/HediaTnani.github.io
webpage
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HediaTnani/NextFlow-Workshop
NextFlow workshop materials for LIBD Rstats club presentation.
HediaTnani/numpy-100
100 numpy exercises (with solutions)
HediaTnani/nv2_Atlas
Scripts to reproduce the analyses and figures in Cole et al. 2023 pre-print
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HediaTnani/physalia-lcwgs
Files for the the Physalia course on Population genomic inference from low-coverage whole-genome sequencing data, Oct 10-13, 2022
HediaTnani/PigGTEx-Pipeline-v0
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HediaTnani/PsychENCODE_SingleCell_Integrative
Integrative Analyses across 388 human brain samples at single-cell resolution
HediaTnani/Quarto_Website
HediaTnani/R-Deep-Learning
Workshop (6 hours): Deep learning in R using Keras. Building & training deep nets, image classification, transfer learning, text analysis, visualization
HediaTnani/rstat_DTE_Feb2024
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HediaTnani/scRNA_PCa
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HediaTnani/scRNA_prediction
Predictive Modeling of Gene Expression in Skeletal Muscle Using scRNA-seq
HediaTnani/teaching
This repository gives an overview of my teaching activities. Links to slides and data sets are included. Feel free to re-use my content.
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HediaTnani/teaching_mf9130e
Course material for MF9130E
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HediaTnani/TeachingDataScience
Course notes for Data Science related topics, prepared in LaTeX
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HediaTnani/TonsilAtlas
Scripts and notebooks to reproduce all analysis from Massoni-Badosa et al. (2022)