HediaTnani
Staff Scientist I @ LIBD | Data Science enthusiast | R & Python passionate | R-Ladies Tunis Co-founder
Lieber Institute for Brain DevelopmentBaltimore
Pinned Repositories
30DayChartChallenge
ABN_Covid_19Workgroup
Involved in Mapping, variant calling and Phylogenetics
Bio-containers
BioNextflow
Library of biological tools for Nextflow
biostatistics
A free biostatistics reading list :)
crs19-monitor
Monitor of SARS-CoV-2 variants and mutations in Europe
gradual_shiny
Workshop introducing Shiny programming concepts
Leishmania
functions and documents
Machine_Learning_with_Python
An introduction to Machine Learning with Python and SciKit
meetup-presentations_brisbane
HediaTnani's Repositories
HediaTnani/BI-BE-CS-183-2023
Introduction to Computational Biology and Bioinformatics Course at Caltech, 2023
HediaTnani/Bioinformatics-Workshops
Workshops presented by the Gladstone Bioinformatics Core
HediaTnani/CSHstats
R vignettes/pkgdown for elementary statistics for a summer course
HediaTnani/EasyMicrobiomeR
Using R language in microbiome analysis
HediaTnani/EuroBioc23_ATAC_multiome
HediaTnani/kimma
Kinship In Mixed Model Analysis of RNA-seq
HediaTnani/learning-statistics-with-webR
Quarto revealjs slides to teach introductory statistics concepts using webR.
HediaTnani/LUAD_Code
HediaTnani/mdx-msc-data-science
Middlesex University Dubai: MSc Data Science. Modelling, Regression and Machine Learning track. Instructor: Dr. Ivan Reznikov
HediaTnani/MSnSet.utils
custom wrappers of frequently used R code
HediaTnani/nextflow-course-2023-fall
Nextflow course
HediaTnani/nf-gwas
A nextflow pipeline to perform state-of-the-art genome-wide association studies.
HediaTnani/nf-tut-2023
HediaTnani/OmicNavigatorExample
Example code to create an OmicNavigator study
HediaTnani/PNNL-Comp-Mass-Spec.github.io
Markdown files displayed at https://pnnl-comp-mass-spec.github.io/
HediaTnani/python-modeling
HediaTnani/qsvaR
Quality Surrogate Variable Analysis for Degradation Correction
HediaTnani/qsvaR_demo
HediaTnani/r-intro
HediaTnani/Rencontres_R_2023
9e Rencontres R à Avignon, France, du 21 au 23 Juin 2023
HediaTnani/scATACpipe
HediaTnani/scMultiomics_AD
All analysis of AD scMultiomics data from Anderson and Rogers et al. 2022
HediaTnani/scRNAseqApp
single cell RNA-seq results report system
HediaTnani/SEARchways
HediaTnani/shiny-r-intro
Getting Started with Shiny for R - posit::conf 2023
HediaTnani/single-cell-benchmark
HediaTnani/Single-cell-RNA-sequencing-analysis
In order to learn scRNAseq analysis, I decided to reconstruct a Nature paper using Python's Scanpy package. The paper examined lung cells from multiple COVID-19 patients to construct a comprehensive cellular atlas. The project is still ongoing, and I welcome any questions, tips, critiques, or suggestions that could help me enhance my skills.
HediaTnani/singleCellTK
Interactively analyze single cell genomic data
HediaTnani/spatial-transcriptomics
HediaTnani/workshop_spatial