Pinned Repositories
append_metabolic
A scalable high-throughput metabolic and biogeochemical functional trait profiler
biopython
Official git repository for Biopython (originally converted from CVS)
Cell_ACDC
A Python GUI-based framework for segmentation, tracking and cell cycle annotations of microscopy data
cellular-automata
Cellular Automata generator
cmseq
Set of utilities on sequences and BAM files
cobra
A tool to raise the quality of viral genomes assembled from short-read metagenomes via resolving and joining of contigs fragmented during de novo assembly.
genome
KEGG-manual
snakemake
This is the development home of the workflow management system Snakemake. For general information, see
MT-SwBw
Hocnonsense's Repositories
Hocnonsense/append_metabolic
A scalable high-throughput metabolic and biogeochemical functional trait profiler
Hocnonsense/biopython
Official git repository for Biopython (originally converted from CVS)
Hocnonsense/Cell_ACDC
A Python GUI-based framework for segmentation, tracking and cell cycle annotations of microscopy data
Hocnonsense/cellular-automata
Cellular Automata generator
Hocnonsense/cmseq
Set of utilities on sequences and BAM files
Hocnonsense/cobra
A tool to raise the quality of viral genomes assembled from short-read metagenomes via resolving and joining of contigs fragmented during de novo assembly.
Hocnonsense/DGantt
Java Gantt Chart Library
Hocnonsense/EasyMicrobiomeR
Using R language in microbiome analysis
Hocnonsense/genome
Hocnonsense/gunc
Python package for detection of chimerism and contamination in prokaryotic genomes.
Hocnonsense/KEGG-manual
Hocnonsense/metaSC
Hocnonsense/hex_sweep
Hexagonal Minesweeper
Hocnonsense/iProEP
Hocnonsense/mantis
A package to annotate protein sequences
Hocnonsense/opentims
Open-source C++ and Python module for opening binary timsTOF data files.
Hocnonsense/panaroo
An updated pipeline for pangenome investigation
Hocnonsense/phylophlan
Precise phylogenetic analysis of microbial isolates and genomes from metagenomes
Hocnonsense/PopCOGenT
Microbial Populations as Clusters Of Gene Transfer
Hocnonsense/pymummer
handle pymummer delta file
Hocnonsense/snakefmt
The uncompromising Snakemake code formatter
Hocnonsense/SnakeMAGs
Hocnonsense/snakemake
This is the development home of the workflow management system Snakemake. For general information, see
Hocnonsense/snakemake-interface-executor-plugins
This package provides a stable interface for interactions between Snakemake and its executor plugins.
Hocnonsense/snakemarkdown
vscode extension
Hocnonsense/vcontact2
Hocnonsense/vscode-markdown-tm-grammar
VS Code built-in markdown extension's Textmate grammar
Hocnonsense/vscode-memo
Markdown knowledge base with bidirectional [[link]]s built on top of VSCode
Hocnonsense/vscode-snakefmt-provider
Hocnonsense/Zutilo
Zotero plugin providing some additional editing features