Microbial communities reveal niche partitioning across the slope and bottom zones of the challenger deep


Description

  • This reposity contain files generate from metagenomic data and tables for figures and other conclusions in the manuscript.

Run

# conda and snakemake required
python -m snakemake all --use-conda
  • files are kept in data_table.zip and can be unzipped before use it with suffixes (xaa and xab).
cat data_table.xa* > data_table.zip
unzip data_table.zip
  • information of software and version are shown in manuscript.