Pinned Repositories
BlockRegistration.jl
Deformable image registration via shift-alignment of blocks
FlyThroughPaths.jl
Create "fly-throughs" in 3d visualization
GPCRAnalysis.jl
Routines for analysis of protein structures
HolyLabRegistry
Julia package registry for the Holy lab at Washington University in St. Louis
Imagine
A graphical interface for recording with OCPI microscopes.
ImagineInterface.jl
Read and write Imagine analog and digital recordings and commands
NMFMerge.jl
Merging components in nonnegative matrix factorization
RegisterDeformation.jl
Representation of spatial deformations
RegisterQD.jl
Image registration with the QuadDIRECT optimization algorithm
ThickNumbers.jl
Abstract type and utility functions for numbers that also act like sets/intervals
Holy Lab's Repositories
HolyLab/BlockRegistration.jl
Deformable image registration via shift-alignment of blocks
HolyLab/ClusteringBenchmarks.jl
Data sets and metrics to evaluate clustering algorithms
HolyLab/ImagineHardware.jl
Access hardware information for essential microscope components used in OCPI microscopes: piezo positioners, amplifiers, cameras, etc
HolyLab/RegisterMismatch.jl
This package is separated from BlockRegistraton.
HolyLab/RFFT.jl
In-place real FFTs for Julia
HolyLab/ImagineInterface.jl
Read and write Imagine analog and digital recordings and commands
HolyLab/InterleavedImages.jl
Lazy interleaving of images (arrays) along a chosen dimension
HolyLab/BlockRegistrationScheduler.jl
Multi-core image registration scheduler
HolyLab/CachedInterpolations.jl
CachedInterpolations implements a performance enhancement for quadratic interpolation of a large multidimensional array. This package is separated from BlockRegistration
HolyLab/EconomicChoice.jl
Utilities for analyzing neuroeconomic choice experiments
HolyLab/FastScanningAndDPI
Directory of code for OCPI fast scanning / DPI publication
HolyLab/Imagine
A graphical interface for recording with OCPI microscopes.
HolyLab/Imagine.jl
Work-in-progress translation of Imagine to Julia
HolyLab/ImaginePlots.jl
Plotting of Imagine's hardware signals (complements ImagineInterface)
HolyLab/ImagineProcedures.jl
Link preparation with analysis of Imagine recordings
HolyLab/RegisterCore.jl
Image registration (low-level types and utilities)
HolyLab/RegisterWorkerApertures.jl
This package is separated from BlockRegistratonScheduler.
HolyLab/RegisterWorkerShell.jl
This package is separated from BlockRegistratonScheduler.
HolyLab/CachedCalls.jl
Delayed function evaluation and caching of returned values
HolyLab/ImagineWorker.jl
Worker thread module for the (WIP) Julia version of Imagine
HolyLab/LinearKernelModels.jl
Fitting multi-kernel linear models to data
HolyLab/msprof_Fu2015
Code for analysis of profiling mass spectrometry datasets
HolyLab/PiezoSerial.jl
Control piezoelectric actuators via serial commands
HolyLab/RegisterDriver.jl
This package is separated from BlockRegistratonScheduler.
HolyLab/RegisterMismatchCuda.jl
This package is separated from BlockRegistraton.
HolyLab/RegisterWorkerAperturesMismatch.jl
This package is separated from BlockRegistratonScheduler.
HolyLab/UnitAliases.jl
A convenient set of aliases for types from Unitful.jl