HugoGuillen

HugoGuillen's Stars

• 3b1b/manim

  Animation engine for explanatory math videos

  Language:Python72.8k9051.2k6.4k

• facebookresearch/fairseq

  Facebook AI Research Sequence-to-Sequence Toolkit written in Python.

  Language:Python30.7k4264.2k6.4k

• google/jax

  Composable transformations of Python+NumPy programs: differentiate, vectorize, JIT to GPU/TPU, and more

  Language:Python30k3285.5k2.7k

• rougier/scientific-visualization-book

  An open access book on scientific visualization using python and matplotlib

  Language:Python10.8k19043993

• pymc-devs/pymc

  Bayesian Modeling and Probabilistic Programming in Python

  Language:Python8.8k2253.3k2k

• ossu/bioinformatics

  :microscope: Path to a free self-taught education in Bioinformatics!

  5.6k36924940

• rmcelreath/stat_rethinking_2023

  Statistical Rethinking Course for Jan-Mar 2023

  Language:R2.2k15115251

• SupaGruen/StableDiffusion-CheatSheet

  A list of StableDiffusion styles and some notes for offline use. Pure HTML, CSS and a bit of JS.

  Language:JavaScript1.9k410143

• Phlya/adjustText

  A small library for automatically adjustment of text position in matplotlib plots to minimize overlaps.

  Language:Jupyter Notebook1.5k1016087

• lh3/seqtk

  Toolkit for processing sequences in FASTA/Q formats

  Language:C1.4k62176307

• kourgeorge/arxiv-style

  A Latex style and template for paper preprints (based on NIPS style)

  Language:TeX1.2k1420321

• MycroftAI/mimic3

  A fast local neural text to speech engine for Mycroft

  Language:Python1.1k2352109

• nf-core/rnaseq

  RNA sequencing analysis pipeline using STAR, RSEM, HISAT2 or Salmon with gene/isoform counts and extensive quality control.

  Language:Nextflow947157674713

• chaoyi-wu/PMC-LLaMA

  The official codes for "PMC-LLaMA: Towards Building Open-source Language Models for Medicine"

  Language:Python61883354

• zqfang/GSEApy

  Gene Set Enrichment Analysis in Python

  Language:Python58311207119

• Auto1111SDK/Auto1111SDK

  An SDK/Python library for Automatic 1111 to run state-of-the-art diffusion models

  Language:Python39992628

• jackwasey/icd

  *New maintainer/owner needed* Fast ICD-10 and ICD-9 comorbidities, decoding and validation in R. NB use main instead of master for default branch.

  Language:R2423118860

• mlin/GenomicSQLite

  Genomics Extension for SQLite

  Language:C++1625011

• BioinformaNicks/Bioinformatics-training-collection

  A collection of resources for learning about tools and programming languages related to Bioinformatics

  1572322

• nf-core/fetchngs

  Pipeline to fetch metadata and raw FastQ files from public databases

  Language:Nextflow1541008374

• Oncorporation/audiocraft

  Audiocraft is a library for audio processing and generation with deep learning. It features the state-of-the-art EnCodec audio compressor / tokenizer, along with MusicGen, a simple and controllable music generation LM with textual and melodic conditioning.

  Language:Python1164014

• bgruening/galaxy-rna-workbench

  Galaxy RNA workbench

  Language:HTML39133135

• cboix/EPIMAP_ANALYSIS

  Epimap processing and analysis code repository

  Language:Jupyter Notebook332414

• cpockrandt/PhyloCSFpp

  PhyloCSF++ computes PhyloCSF tracks for whole-genome multiple sequence alignments, scores single MSA, annotates CDS features in GFF/GTF files with PhyloCSF and confidence scores.

  Language:C++30384

• jupyter-widgets-contrib/ipyigv

  A Jupyter wrapper for the igv.js library (representation of genomic data)

  Language:Python26675

• ohlerlab/DeepRiPe

  Language:Jupyter Notebook24376

• pinellolab/CRISPR-SURF

  Language:Python15253

• AdarLab/Damage_asymmetry

  Language:R2100

• Danko-Lab/stabilityHMM

  Inference of transcript stability from polyA and 5' splice site sequence elements

  Language:R22301

• wolfsonliu/zfc

  ZFC is a software to calculate fold change zscore of screening data.

  Language:Python2104