IEDB/TCRMatch

Issues

• Query on Modified BLOSUM62

  #54 opened 5 months ago
  1

• Possible to have TCRMatch ignore invalid CDR3s?

  #52 opened 8 months ago
  2

• Installation error

  #51 opened 8 months ago
  4

• Running TCRMatch with incomplete CDR3 sequences

  #50 opened 10 months ago
  1

• Is it possible to install TCR match on MacOS Monterey Version 12.2.1?

  #49 opened a year ago
  7

• Does TRCmatch works with DNN

  #48 opened a year ago
  2

• Subject: Including the <sstream> header to resolve stringstream-related compilation errors

  #46 opened a year ago
  2

• CEDAR

  #45 opened a year ago
  3

• Add more unit tests using Catch2

  #44 opened a year ago
  0

• Buggy results when compiled with Intel oneAPI DPC++/C++ Compiler

  #43 opened a year ago
  7

• Release 1.1

  #42 opened a year ago
  1

• output is a 3 column file

  #40 opened a year ago
  6

• IEDB data files need to be versioned somehow for provenance

  #38 opened a year ago
  0

• please add a version number output

  #37 opened 8 months ago
  3

• Which species does TCRMatch work with?

  #36 opened 2 years ago
  1

• Score filtering looks inconsistent

  #34 opened 2 years ago
  2

• empty output

  #33 opened 2 years ago
  2

• Fix harbor.yml Github Action

  #32 opened 2 years ago
  1

• Add trimming of C and F/W amino acids from input CDR3 sequences by default

  #31 opened 2 years ago
  2

• Unify the process output python + tcrmatch.cpp files

  #29 opened 3 years ago
  5

• No headers on output

  #28 opened 3 years ago
  1

• support for AIRR TSV input

  #26 opened 3 years ago
  1

• Harbor Credentials

  #24 opened 3 years ago
  2

• similarity metric threshold cannot exceed 1, but runs anyway, also negative numbers

  #23 opened 3 years ago
  1

• Cannot run "tcrmatch" executable from different directory

  #22 opened 3 years ago
  9

• output should be in various formats specified

  #21 opened 3 years ago
  2

• # of threads input doesn't account for negative numbers or decimals

  #20 opened 3 years ago
  2

• TCR sequences import

  #17 opened 3 years ago
  3

• Add argparse for Python script

  #16 opened 3 years ago
  0

• Add shebang to Python script

  #15 opened 3 years ago
  0

• Compilation issues

  #14 opened 3 years ago
  5

• Add -d parameter for database location

  #13 opened 3 years ago
  0

• Allow process_output.py to have relative paths

  #12 opened 3 years ago
  0

• Add boolean param for IEDB receptor group

  #11 opened 3 years ago
  0

• Add Dockerfile

  #10 opened 3 years ago
  0

• Increase portability and compatibility

  #9 opened 3 years ago
  0

• compile error

  #8 opened 3 years ago
  19

• Add proper CI and unit testing for future builds

  #7 opened 2 years ago
  1

• Create simple TCRMatch method call

  #6 opened 3 years ago
  0

• Create update feature for reproducibility

  #3 opened 3 years ago
  1

• segmentation fault

  #2 opened 3 years ago
  3