IHCC-cohorts/data-harmonization
International HundredK+ Cohorts Consortium (IHCC) Data Harmonization
Jupyter NotebookApache-2.0
Issues
- 5
Missing OxO mappings?
#175 opened by mcourtot - 8
Add more elements to Metadata for DAC
#137 opened by beckyjackson - 4
- 0
Replace `robot validate`
#170 opened by jamesaoverton - 1
Validation problem when email does not have *.gmail
#179 opened by cgarcia5 - 11
Update maelstrom.owl
#182 opened by jamesaoverton - 1
Replace "robot tree" with Gizmos?
#176 opened by beckyjackson - 1
Ontology/term history link not working
#180 opened by mcourtot - 2
20210528 - Facet Review form OICR
#173 opened by rosibaj - 2
20210521 - Data Review from OICR
#172 opened by rosibaj - 0
Add DUO codes at submission time
#171 opened by mcourtot - 4
Download links do not work
#166 opened by mcourtot - 3
Fix versions for python dependencies?
#79 opened by matentzn - 6
Make sure data dictionary version iris resolve
#145 opened by matentzn - 2
update label 'ontologies' in registry
#163 opened by mcourtot - 2
- 9
Add metadata for cohort 'admin'
#120 opened by mcourtot - 1
Genomics England mappings
#161 opened by mcourtot - 1
Rethink mappings to "basic cohort attributes"
#128 opened by beckyjackson - 3
Git error when running pipeline in ODK container
#81 opened by matentzn - 6
Duplicate ids in templates
#95 opened by matentzn - 2
File temp path configurability in worflow.py
#97 opened by matentzn - 1
- 9
- 0
Consider capturing mapping provenance
#168 opened by beckyjackson - 0
Should the IHCC Data Steward curate labels?
#117 opened by matentzn - 1
"Open Google Sheet" returns error
#132 opened by beckyjackson - 5
Case sensitivity in the browser facets
#160 opened by mcourtot - 2
Reset ontology tree does not work
#164 opened by mcourtot - 0
Remove graph view button from registry
#165 opened by mcourtot - 0
Error pages issues
#167 opened by mcourtot - 1
Registry update?
#162 opened by mcourtot - 0
`_` in cohort.json should be cleaned to Sentence Case
#139 opened by rosibaj - 0
Update headers for `cogs apply`
#133 opened by beckyjackson - 1
- 1
Fix workflow script to keep sheet titles
#118 opened by jamesaoverton - 2
- 2
Finish up documentation
#116 opened by matentzn - 4
Data dictionaries: How to handle foreign ids?
#92 opened by matentzn - 5
Diff of data/cohort-data.json still too large
#111 opened by matentzn - 1
- 0
Suggested categories still in template during “add data dictionary to VC step”
#107 opened by matentzn - 2
Pre-populate mapping field with best suggestion >0.97
#112 opened by matentzn - 1
- 1
Add "cancel" button to workflows.py
#99 opened by matentzn - 6
- 5
Get validation workflow running with DROID
#90 opened by beckyjackson - 1
Redirect to branch after upload process is done
#98 opened by matentzn - 0
- 0
Improve template workflow
#83 opened by beckyjackson