Illumina/pyflow

Issues

• adding compatibility to other cluster job scheduler such as TORQUE

  #7 opened 9 years ago by hengwangxian
  2

• Does this support restart of the failed workflow?

  #26 opened 4 years ago by serajan
  0

• pyflow can hang on SMTP check, add a timeout to escape this case

  #22 opened 6 years ago by ctsa
  1

• Python 3 support

  #20 opened 7 years ago by ajasja
  4

• Installation by Pip

  #24 opened 6 years ago by DarioS
  0

• Add option to disable fsync through the API

  #23 opened 6 years ago by ctsa
  0

• Add cwd argument to addWorkflowTask

  #21 opened 7 years ago by virajbdeshpande
  2

• Repeated task records in info/runstate files

  #19 opened 7 years ago by ctsa
  0

• Tasks state files are not updated on interrupt/exception

  #18 opened 7 years ago by ctsa
  0

• Notification mail received but the pyflow process still running

  #16 opened 9 years ago by kcshashidhar
  1

• Catching exception when a workflow exceeds thread limits

  #17 opened 9 years ago by kcshashidhar
  0

• Issue with SGE cluster that automatically loads environment variables

  #14 opened 9 years ago by amiraa127
  2

• Running dependent tasks on the same node

  #13 opened 9 years ago by amiraa127
  4

• sub tasks with the same label blocking eachother

  #12 opened 9 years ago by isthisthat
  1

• os.chmod in line 744 is not allowed

  #10 opened 9 years ago by jmtoung
  1

• Make pyflow robust to OS/filesystem delays in writing each task's pickle parameter file

  #9 opened 9 years ago by ctsa
  0

• Help modifying startTasksFrom to support sub-WorkflowTasks

  #6 opened 9 years ago by hyjkim
  1

• Add option to cleanup pyflow.data directory after successful run completion

  #1 opened 11 years ago by isthisthat
  3

• Can I specify the task name instead of "pyflowTask"?

  #3 opened 11 years ago by isthisthat
  1

• Enable use of the DRMAA library for cluster job submission

  #8 opened 9 years ago by ctsa
  0

• v1.1.4 causes problems when self.getRunMode() is called from a WorkflowTask

  #5 opened 9 years ago by hyjkim
  3

• WorkflowRunner.addTask() does not accept 'unlimited' for memMb attribute

  #4 opened 10 years ago by hyjkim
  5

• Anomolous task wrapper

  #2 opened 11 years ago by isthisthat
  1