ImagingDataCommons/idc-index

Issues

• Generate citations for the DOIs referenced in the selected cohort

  #31 opened 4 months ago by fedorov
  0

• Enable building preview of pull-request documentation

  #82 opened 4 months ago by jcfr
  6

• Fix auto-generated documentation pages

  #74 opened 4 months ago by fedorov
  1

• Allow download into hierarchy specified in the manifest

  #79 opened 4 months ago by fedorov
  0

• improper handling of nulls in get_patients

  #76 opened 4 months ago by vkt1414
  0

• Installed s5cmd should be used and not the system

  #75 opened 4 months ago by fedorov
  3

• Runtime error failing to import `idc_index._version`

  #69 opened 4 months ago by fedorov
  2

• Add an option to download into user-defined hierarchy

  #22 opened 4 months ago by fedorov
  7

• Add support for access to clinical data

  #73 opened 4 months ago by fedorov
  0

• Revisit progress reporting

  #24 opened 4 months ago by fedorov
  0

• Instance urls returned by get_series_file_URLs contains non dicom file urls

  #66 opened 4 months ago by vkt1414
  0

• Query results inconsistent with BQ (probably?) due to handling of None on import

  #63 opened 4 months ago by fedorov
  0

• Revisit error handling

  #13 opened 5 months ago by fedorov
  2

• Missing Fields in IDC Index

  #64 opened 5 months ago by varikmp
  1

• Incorrect idc_version in get_idc_version

  #55 opened 5 months ago by vkt1414
  0

• Revisit testing

  #14 opened 5 months ago by fedorov
  1

• `download_from_manifest` takes destinationDir, but it has no effect

  #17 opened 6 months ago by fedorov
  1

• `series_url` should not contain asterisk

  #16 opened 6 months ago by fedorov
  1

• idc-index CSV is not packaged with the refactored organization of the repo

  #41 opened 6 months ago by fedorov
  6

• Consider creating a Python package called `idc-index-data`

  #49 opened 6 months ago by jcfr
  3

• Improve error reporting when invalid identifiers are passed by the user

  #51 opened 6 months ago by fedorov
  1

• Add command-line python tools to assist with download

  #33 opened 7 months ago by fedorov
  2

• Fix wheel testing step

  #38 opened 7 months ago by fedorov
  2

• pip install from the source tree does not work

  #15 opened 7 months ago by fedorov
  3

• Fix test failures while running `nox`

  #35 opened 7 months ago by fedorov
  5

• Address index init regression introduced in published version 0.2.9

  #27 opened 8 months ago by fedorov
  0

• Making sure to resolve properly

  #2 opened 10 months ago by vkt1414
  2

• Download index csv and s5cmd binary at the time of the install

  #3 opened 10 months ago by fedorov
  9