Pinned Repositories
bwa-mem2
The next version of bwa-mem
Anvi-o-Summaries
Easy to access Anvi'o summary to ensure data disponibility
chopper_aarch64
Cross-compiling for chopper on aarch64
Epi2me_output_converter
Simple R command lines to convert EPI2ME 16S barcoding output to classical OTU table (phyloseq like). Not perfect as "Unclassified" taxa are merged together and I see no way to differentiate them as EPI2ME output does not give a cluster ID or something alike
NanoASV
NanoASV official repo
NanoCLUST_Get_abundance.py
NanoCLUST is an analysis pipeline for UMAP-based classification of amplicon-based full-length 16S rRNA nanopore reads
TD-Metabarcoding
TP-Metagenomics
TP-Metagenomics
Flye
De novo assembler for single molecule sequencing reads using repeat graphs
openFPGA-GBA
Game Boy Advance core for openFPGA on Analogue Pocket
ImagoXV's Repositories
ImagoXV/NanoASV
NanoASV official repo
ImagoXV/Epi2me_output_converter
Simple R command lines to convert EPI2ME 16S barcoding output to classical OTU table (phyloseq like). Not perfect as "Unclassified" taxa are merged together and I see no way to differentiate them as EPI2ME output does not give a cluster ID or something alike
ImagoXV/Anvi-o-Summaries
Easy to access Anvi'o summary to ensure data disponibility
ImagoXV/chopper_aarch64
Cross-compiling for chopper on aarch64
ImagoXV/NanoCLUST_Get_abundance.py
NanoCLUST is an analysis pipeline for UMAP-based classification of amplicon-based full-length 16S rRNA nanopore reads
ImagoXV/TD-Metabarcoding
ImagoXV/TP-Metagenomics
TP-Metagenomics