JetBrains-Research/jbr

Issues

• Update JBR Application building pipeline for MacOS after deprecation of altool

  #282 opened 8 months ago by olegs
  0

• Add autoscale and group scale to undo/redo history

  #275 opened 8 months ago by Xewar313
  0

• Do not generate commands in UNDO/REDO stack when command actually doesn't change things

  #278 opened 8 months ago by iromeo
  0

• Allow to view overlap regions in region list dialog

  #252 opened 10 months ago by iromeo
  0

• Enhance Redo/Undo so it control Track & Panel operations

  #262 opened 9 months ago by iromeo
  0

• Change Location - provide some details on location

  #269 opened 9 months ago by Xewar313
  0

• IllegalStateException 490552362 Thread[pool-1-thread-7,5,main] NO group for

  #274 opened 9 months ago by iromeo
  1

• Fix scale when using absolute scores as transparency values

  #281 opened 8 months ago by Xewar313
  0

• Zoom on wheel generates to many cmds in undo/redo stack

  #277 opened 8 months ago by iromeo
  0

• Refactor score as transparency level and score as absolute transperency level into one mutually exclusive context menu setting

  #279 opened 8 months ago by iromeo
  0

• Track color change dialog is shown on the default monitor if several monitors is used

  #280 opened 9 months ago by iromeo
  1

• "Enter" shortcut doesn't allow to rename multiple tracks

  #276 opened 9 months ago by iromeo
  0

• Add option to extract overlapping reads from bed tracks to separate file

  #273 opened 9 months ago by Xewar313
  0

• Latest version of SPAN (1.5) is not supported?

  #272 opened 9 months ago by AlePur
  1

• Add mouse location change to the history

  #270 opened 9 months ago by Xewar313
  0

• Add enter title change to history

  #271 opened 9 months ago by Xewar313
  0

• Provide additional information on overlapped regions

  #268 opened 10 months ago by Xewar313
  0

• Allow to open GTF files as Genes tracks in JBR

  #258 opened 10 months ago by iromeo
  0

• Feedback on Region Selection Dialog

  #261 opened a year ago by iromeo
  0

• Show whether current session is modified

  #265 opened a year ago by iromeo
  0

• Feedback: Panels Support

  #263 opened a year ago by iromeo
  0

• Feedback: Select tracks by name

  #266 opened a year ago by iromeo
  0

• Feedback: Donwload track

  #264 opened a year ago by iromeo
  0

• Add notification on longer processes

  #267 opened a year ago by Xewar313
  0

• New session is appended to existing one ignoring new session panels structure

  #260 opened a year ago by iromeo
  2

• Multiple track panels support.

  #243 opened a year ago by iromeo
  1

• Panels are not saved in JBR session

  #248 opened a year ago by Xewar313
  0

• 'Remove Panel and Tracks` is enabled when only a single (default) panel is used. Action doesn nothing and is better to disable it

  #256 opened a year ago by iromeo
  0

• Cannot remove panel if it is the first panel in the list

  #255 opened a year ago by Xewar313
  0

• Allow to open 2bit file as sequence track

  #259 opened a year ago by iromeo
  0

• Allow to change Score columen for CGI track + make actions similar to Bed track view when applicable

  #257 opened a year ago by iromeo
  1

• Show score column & allow to sort by it in region selection tool

  #251 opened a year ago by iromeo
  0

• Grid doesn't match tracks

  #253 opened a year ago by iromeo
  0

• Improve usability of find missing file dialog

  #254 opened a year ago by iromeo
  1

• Allow to change BED format for tracks.

  #238 opened a year ago by iromeo
  1

• Add region selection tool

  #250 opened a year ago by Xewar313
  0

• Panels are not saved in IGV session

  #249 opened a year ago by Xewar313
  0

• Allow downloading track sources from remote

  #239 opened a year ago by Xewar313
  0

• Multiple tracks selection feature

  #242 opened a year ago by iromeo
  0

• Allow tracks creation by Drag & Drop a file into JBR window

  #240 opened a year ago by iromeo
  0

• java.util.concurrent.CancellationException is constantly thrown on mouse move (see log)

  #247 opened a year ago by iromeo
  0

• Detailed information at bed location perfomance could be improved

  #237 opened a year ago by iromeo
  1

• Session export in IGV format doesn't include `type` tag in resource section

  #246 opened a year ago by iromeo
  0

• More output formats support in Overlap/Jaccard export dialog

  #245 opened a year ago by iromeo
  0

• Double Save Session dialog

  #244 opened a year ago by iromeo
  0

• Do not expand symlinks while creating tracks / saving session

  #241 opened a year ago by iromeo
  0

• Add progress dialog for export visilbe region as bam/sam

  #235 opened a year ago by iromeo
  0

• Bigwig - show name of values adjustment in detailed view, e.g. if `log` is used

  #233 opened a year ago by iromeo
  0

• Change back and forward shortcut

  #236 opened a year ago by Xewar313
  0

• Add special support for RNA-Seq BAM files

  #234 opened a year ago by iromeo
  0